RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 NOVP48745 357 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 WDR5P61964 334 aaKnown RBP18.04■□□□□ 0.48
CLIP2-202ENST00000361545 DENND5AQ6IQ26 1287 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 CEACAM20Q6UY09 585 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 MMABQ96EY8 250 aaPredicted RBP18.04■□□□□ 0.48
CLIP2-202ENST00000361545 FCRL3Q96P31 734 aaPredicted RBP18.04■□□□□ 0.48
CLIP2-202ENST00000361545 LINC00597Q9H2U6 94 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 THUMPD1Q9NXG2 353 aaKnown RBP18.04■□□□□ 0.48
CLIP2-202ENST00000361545 PSMA1P25786 263 aaKnown RBP18.03■□□□□ 0.48
CLIP2-202ENST00000361545 CST6Q15828 149 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 CYP27C1Q4G0S4 372 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 OR4K17Q8NGC6 315 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 OR2AJ1Q8NGZ0 328 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 GPR34Q9UPC5 381 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 CCDC182A6NF36 153 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 H7C0S8 307 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 PLOD3O60568 738 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 COQ9O75208 318 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 NR4A1P22736 598 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 DUOXA1Q1HG43 343 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 CRB2Q5IJ48 1285 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 TSACCQ96A04 125 aaPredicted RBP18.03■□□□□ 0.48
CLIP2-202ENST00000361545 GIN1Q9NXP7 522 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 DLGAP4Q9Y2H0 992 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 TOPAZ1Q8N9V7 1692 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 RSL1D1O76021 490 aaKnown RBP18.03■□□□□ 0.48
CLIP2-202ENST00000361545 TLR1Q15399 786 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 LACTB2Q53H82 288 aaPredicted RBP18.03■□□□□ 0.48
CLIP2-202ENST00000361545 FAM131AQ6UXB0 335 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 TP53INP2Q8IXH6 220 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 PLD6Q8N2A8 252 aaKnown RBP18.03■□□□□ 0.48
CLIP2-202ENST00000361545 MR1Q95460 341 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 TBX5Q99593 518 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 PDLIM7Q9NR12 457 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 CFL2Q9Y281 166 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 DHRS7Q9Y394 339 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 FAM221BA6H8Z2 402 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 OR6C74A6NCV1 312 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 M0QZQ0 153 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 CHST4Q8NCG5 386 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 MCFD2Q8NI22 146 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 ZIM2Q9NZV7 527 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 COMMD9Q9P000 198 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 DNAJB9Q9UBS3 223 aa18.03■□□□□ 0.48
CLIP2-202ENST00000361545 A0A075B6Q4 140 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 C2orf74A8MZ97 194 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 SLC22A2O15244 555 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 MID1O15344 667 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 MPZL2O60487 215 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 RBMXL2O75526 392 aaKnown RBP18.02■□□□□ 0.48
CLIP2-202ENST00000361545 ACRV1P26436 265 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 SLC5A9Q2M3M2 681 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 ZNF852Q6ZMS4 543 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 P4HA3Q7Z4N8 544 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 SLC30A8Q8IWU4 369 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 NATD1Q8N6N6 113 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 TMED5Q9Y3A6 229 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 ZNF726A6NNF4 738 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 PSMD9O00233 223 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 SRPRAP08240 638 aaKnown RBP18.02■□□□□ 0.48
CLIP2-202ENST00000361545 S100GP29377 79 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 MC1RQ01726 317 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 CST9Q5W186 159 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 SLCO6A1Q86UG4 719 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 NFKBIDQ8NI38 313 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 SLC2A11Q9BYW1 496 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 METTL7AQ9H8H3 244 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 TBC1D17Q9HA65 648 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 AGR2O95994 175 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 C6P13671 934 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 TBC1D25Q3MII6 688 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 SPANXN4Q5MJ08 99 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 CHERPQ8IWX8 916 aaKnown RBP18.02■□□□□ 0.48
CLIP2-202ENST00000361545 TRPV1Q8NER1 839 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 TGM7Q96PF1 710 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 CHCHD6Q9BRQ6 235 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 OSBPL7Q9BZF2 842 aa18.02■□□□□ 0.48
CLIP2-202ENST00000361545 APOBEC3BQ9UH17 382 aaKnown RBP18.02■□□□□ 0.48
CLIP2-202ENST00000361545 ACADLP28330 430 aa18.02■□□□□ 0.47
CLIP2-202ENST00000361545 DECR1Q16698 335 aa18.02■□□□□ 0.47
CLIP2-202ENST00000361545 USP30Q70CQ3 517 aa18.02■□□□□ 0.47
CLIP2-202ENST00000361545 IKBIPQ70UQ0 350 aa18.02■□□□□ 0.47
CLIP2-202ENST00000361545 CRYGNQ8WXF5 182 aa18.02■□□□□ 0.47
CLIP2-202ENST00000361545 IL17FQ96PD4 163 aa18.02■□□□□ 0.47
CLIP2-202ENST00000361545 RGPD5Q99666 1765 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 RENP00797 406 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 LYNP07948 512 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 ACVR2AP27037 513 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 KCNJ5P48544 419 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 CCT3P49368 545 aaKnown RBP18.01■□□□□ 0.47
CLIP2-202ENST00000361545 LASP1Q14847 261 aaKnown RBP18.01■□□□□ 0.47
CLIP2-202ENST00000361545 QPRTQ15274 297 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 RGS21Q2M5E4 152 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 PSAPL1Q6NUJ1 521 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 PIGWQ7Z7B1 504 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 OR10G2Q8NGC3 310 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 PHOSPHO1Q8TCT1 267 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 CAMK1GQ96NX5 476 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 CAPN14A8MX76 684 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 FAM25EA8MYX2 175 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms