RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 GPATCH2Q9NW75 528 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 MAGED1Q9Y5V3 778 aaPredicted RBP2.75□□□□□ -1.97
LTN1-201ENST00000361371 SNX13Q9Y5W8 968 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 ZFHX2Q9C0A1 2572 aaPredicted RBP2.75□□□□□ -1.97
LTN1-201ENST00000361371 GABRR3A8MPY1 467 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 SLCO1B7G3V0H7 640 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 B4GALT2O60909 372 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 SNRPB2P08579 225 aaKnown RBP2.75□□□□□ -1.97
LTN1-201ENST00000361371 CBSLP0DN79 551 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 JUNDP17535 347 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 CBSP35520 551 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 SOX18P35713 384 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 CXCL12P48061 93 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 GFERP55789 205 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 RPL6Q02878 288 aaKnown RBP2.75□□□□□ -1.97
LTN1-201ENST00000361371 GAB1Q13480 694 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 E2F2Q14209 437 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 HKDC1Q2TB90 917 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 NXPE4Q6UWF7 544 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 PRR23CQ6ZRP0 262 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 TRIM46Q7Z4K8 759 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 AMIGO2Q86SJ2 522 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 TRIM69Q86WT6 500 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.75□□□□□ -1.97
LTN1-201ENST00000361371 SPEM1Q8N4L4 309 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 TMEM52Q8NDY8 209 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 RP9Q8TA86 221 aaKnown RBP2.75□□□□□ -1.97
LTN1-201ENST00000361371 GTF2H4Q92759 462 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 SPDL1Q96EA4 605 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 ZNF583Q96ND8 569 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 GPATCH1Q9BRR8 931 aaKnown RBP2.75□□□□□ -1.97
LTN1-201ENST00000361371 NUSAP1Q9BXS6 441 aaKnown RBP2.75□□□□□ -1.97
LTN1-201ENST00000361371 TRIM54Q9BYV2 358 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 REXO4Q9GZR2 422 aaKnown RBP2.75□□□□□ -1.97
LTN1-201ENST00000361371 SERHLQ9NQF3 203 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 CCDC177Q9NQR7 707 aaPredicted RBP2.75□□□□□ -1.97
LTN1-201ENST00000361371 ADA2Q9NZK5 511 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 TMEM9Q9P0T7 183 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 KLHL42Q9P2K6 505 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 TRPS1Q9UHF7 1281 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 SIT1Q9Y3P8 196 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 KCNE2Q9Y6J6 123 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 CUL9Q8IWT3 2517 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 EP300Q09472 2414 aaPredicted RBP2.75□□□□□ -1.97
LTN1-201ENST00000361371 CACNA1HO95180 2353 aa2.75□□□□□ -1.97
LTN1-201ENST00000361371 NPIPB8E9PQR5 432 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 H2AFYO75367 372 aaKnown RBP2.74□□□□□ -1.97
LTN1-201ENST00000361371 SLC22A3O75751 556 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 C8orf89P0DMQ9 161 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 MRPS22P82650 360 aaKnown RBP2.74□□□□□ -1.97
LTN1-201ENST00000361371 ACSM2AQ08AH3 577 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 HYAL2Q12891 473 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 KIAA1614Q5VZ46 1190 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 ACSM2BQ68CK6 577 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 C8orf82Q6P1X6 216 aaPredicted RBP2.74□□□□□ -1.97
LTN1-201ENST00000361371 ABRAXAS1Q6UWZ7 409 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 TAF8Q7Z7C8 310 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 SCUBE1Q8IWY4 988 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 RIMKLAQ8IXN7 391 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 AVL9Q8NBF6 648 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 KYQ8NBH2 561 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 OR8K5Q8NH50 307 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 OR5K2Q8NHB8 316 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.74□□□□□ -1.971e-7■■■□□ 15.1
LTN1-201ENST00000361371 SLC13A3Q8WWT9 602 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 CLDN23Q96B33 292 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 KLHDC7BQ96G42 594 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 SCARF2Q96GP6 870 aaPredicted RBP2.74□□□□□ -1.97
LTN1-201ENST00000361371 C17orf62Q9BQA9 187 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 ZCCHC2Q9C0B9 1178 aaKnown RBP2.74□□□□□ -1.97
LTN1-201ENST00000361371 EML4Q9HC35 981 aaKnown RBP2.74□□□□□ -1.97
LTN1-201ENST00000361371 TXLNGQ9NUQ3 528 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.74□□□□□ -1.97
LTN1-201ENST00000361371 MYO18AQ92614 2054 aaKnown RBP2.74□□□□□ -1.97
LTN1-201ENST00000361371 PIPSLA2A3N6 862 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 OR6C74A6NCV1 312 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 FAM86C2PA6NEL3 165 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 PLPP1O14494 284 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 SLC16A5O15375 505 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 P2RX6O15547 441 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 OR1F1O43749 312 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 KRT6AP02538 564 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 KRT6BP04259 564 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 KLK1P06870 262 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 IL3P08700 152 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 ANXA4P09525 319 aaPredicted RBP2.74□□□□□ -1.97
LTN1-201ENST00000361371 F3P13726 295 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 ST6GAL1P15907 406 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 GNAZP19086 355 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 KELP23276 732 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 PKLRP30613 574 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 KRT6CP48668 564 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 ST13P50502 369 aaKnown RBP2.74□□□□□ -1.97
LTN1-201ENST00000361371 IST1P53990 364 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 MTTPP55157 894 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 ID2Q02363 134 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 EMX2Q04743 252 aa2.74□□□□□ -1.97
LTN1-201ENST00000361371 PRDX1Q06830 199 aaKnown RBP2.74□□□□□ -1.97
LTN1-201ENST00000361371 ILF3Q12906 894 aaKnown RBP eCLIP2.74□□□□□ -1.97
LTN1-201ENST00000361371 NFYCQ13952 458 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms