RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 PCDHGA7Q9Y5G6 932 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 PCDHGA2Q9Y5H1 932 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 DOCK9Q9BZ29 2069 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 POM121BA6NF01 834 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 PDZK1P1A8MUH7 402 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 H3BNX3 289 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 ANKRD28O15084 1053 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 FKBP9O95302 570 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 TNFAIP8O95379 198 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 CAPNS1P04632 268 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 BCKDHAP12694 445 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 CCR8P51685 355 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 FOLH1Q04609 750 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 ILF3Q12906 894 aaKnown RBP eCLIP12.82□□□□□ -0.366e-8■■■■■ 27.3
NFIX-201ENST00000358552 IQCHQ86VS3 1027 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 ALDH16A1Q8IZ83 802 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 VPS37AQ8NEZ2 397 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 NCSTNQ92542 709 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 CXorf40BQ96DE9 158 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 TOE1Q96GM8 510 aaKnown RBP12.82□□□□□ -0.36
NFIX-201ENST00000358552 CAMK1GQ96NX5 476 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 INSM2Q96T92 566 aaPredicted RBP12.82□□□□□ -0.36
NFIX-201ENST00000358552 RHBGQ9H310 441 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 CLMPQ9H6B4 373 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 SLC52A3Q9NQ40 469 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 FARSBQ9NSD9 589 aaKnown RBP12.82□□□□□ -0.36
NFIX-201ENST00000358552 OR6C2Q9NZP2 312 aa12.82□□□□□ -0.36
NFIX-201ENST00000358552 POLR3HQ9Y535 204 aaPredicted RBP12.82□□□□□ -0.36
NFIX-201ENST00000358552 A0A1W2PPC4 97 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 KRBA1A5PL33 1030 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 FAM170BA6NMN3 283 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 RASGRP1O95267 797 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 MTHFD1P11586 935 aaKnown RBP12.81□□□□□ -0.36
NFIX-201ENST00000358552 RPL10P27635 214 aaKnown RBP12.81□□□□□ -0.36
NFIX-201ENST00000358552 PEX2P28328 305 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 SHMT2P34897 504 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 GRK3P35626 688 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 RPS9P46781 194 aaKnown RBP12.81□□□□□ -0.36
NFIX-201ENST00000358552 ARFIP1P53367 373 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 SRP54P61011 504 aaKnown RBP12.81□□□□□ -0.36
NFIX-201ENST00000358552 NFYCQ13952 458 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 UBXN2BQ14CS0 331 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 TLR1Q15399 786 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 AASDHQ4L235 1098 aaPredicted RBP12.81□□□□□ -0.36
NFIX-201ENST00000358552 SFT2D3Q587I9 215 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 RNF220Q5VTB9 566 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 NOXRED1Q6NXP6 359 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 TMIGD1Q6UXZ0 262 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 GCNT7Q6ZNI0 430 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 HID1Q8IV36 788 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 LIX1Q8N485 282 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 NATD1Q8N6N6 113 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 SPDYE1Q8NFV5 336 aaPredicted RBP12.81□□□□□ -0.36
NFIX-201ENST00000358552 TNIP2Q8NFZ5 429 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 HUS1BQ8NHY5 278 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 MTFMTQ96DP5 389 aaKnown RBP12.81□□□□□ -0.36
NFIX-201ENST00000358552 DUS3LQ96G46 650 aaKnown RBP12.81□□□□□ -0.36
NFIX-201ENST00000358552 QRFPRQ96P65 431 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 GSDMCQ9BYG8 508 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 SLC24A3Q9HC58 644 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 FGF22Q9HCT0 170 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 TM7SF3Q9NS93 570 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 MAP10Q9P2G4 905 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 GIMAP2Q9UG22 337 aa12.81□□□□□ -0.36
NFIX-201ENST00000358552 PIPSLA2A3N6 862 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 TXNDC9O14530 226 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 PRAMEF4O60810 478 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 ERN1O75460 977 aaKnown RBP12.8□□□□□ -0.36
NFIX-201ENST00000358552 SEMA3DO95025 777 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 KCNH1O95259 989 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 FUCA1P04066 466 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 ZCCHC18P0CG32 403 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 HSD17B1P14061 328 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 CD22P20273 847 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 CAPN3P20807 821 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 RPL5P46777 297 aaKnown RBP12.8□□□□□ -0.36
NFIX-201ENST00000358552 AQP4P55087 323 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 PRDX1Q06830 199 aaKnown RBP12.8□□□□□ -0.36
NFIX-201ENST00000358552 PWP1Q13610 501 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 SLBPQ14493 270 aaKnown RBP eCLIP12.8□□□□□ -0.36
NFIX-201ENST00000358552 RPE65Q16518 533 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 MAPKAPK3Q16644 382 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 PRAMEF9Q5VWM5 478 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 LPCAT4Q643R3 524 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 SLC36A4Q6YBV0 504 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 MAMSTRQ6ZN01 415 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 Q6ZSR6 202 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 FAM129CQ86XR2 697 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 RBM12BQ8IXT5 1001 aaKnown RBP12.8□□□□□ -0.36
NFIX-201ENST00000358552 OR4K1Q8NGD4 311 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 OR8J3Q8NGG0 315 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 SLC13A3Q8WWT9 602 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 CLDN23Q96B33 292 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 MRPS26Q9BYN8 205 aaKnown RBP12.8□□□□□ -0.36
NFIX-201ENST00000358552 FZD3Q9NPG1 666 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 IMP3Q9NV31 184 aaKnown RBP12.8□□□□□ -0.36
NFIX-201ENST00000358552 CD300AQ9UGN4 299 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 KCNK6Q9Y257 313 aa12.8□□□□□ -0.36
NFIX-201ENST00000358552 PCYT1BQ9Y5K3 369 aaPredicted RBP12.8□□□□□ -0.36
NFIX-201ENST00000358552 ARHGAP10A1A4S6 786 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms