RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 BPIFB3P59826 476 aa9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 SLC35A2P78381 396 aa9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 ZP2Q05996 745 aa9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 SEMA5AQ13591 1074 aa9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 EXOSC2Q13868 293 aaKnown RBP9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 CAPRIN1Q14444 709 aaKnown RBP9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 TTC23Q5W5X9 447 aa9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 ALKAL1Q6UXT8 129 aa9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 VWA5B2Q8N398 1253 aa9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 AMER2Q8N7J2 671 aa9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 GANCQ8TET4 914 aa9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 EDARADDQ8WWZ3 215 aa9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 AURKBQ96GD4 344 aaPredicted RBP9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 MYO19Q96H55 970 aa9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 PDLIM5Q96HC4 596 aaKnown RBP9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 MCCC1Q96RQ3 725 aaPredicted RBP9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 C11orf54Q9H0W9 315 aaPredicted RBP9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 DUSP21Q9H596 190 aa9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 TRIM45Q9H8W5 580 aaPredicted RBP9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 ABCD2Q9UBJ2 740 aa9.04□□□□□ -0.96
SMARCAL1-202ENST00000358207 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 RFPL3O75679 317 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 HBQ1P09105 142 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 CNTFP26441 200 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 TNFSF8P32971 234 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 NUP62P37198 522 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 ZNF79Q15937 498 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 TRNP1Q6NT89 227 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 SYVN1Q86TM6 617 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 ASB15Q8WXK1 588 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 KHSRPQ92945 711 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 MRPL48Q96GC5 212 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 EBNA1BP2Q99848 306 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 CATSPERZQ9NTU4 200 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 OXSMQ9NWU1 459 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 EVLQ9UI08 416 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 ALG5Q9Y673 324 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 TCF20Q9UGU0 1960 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 TDRD15B5MCY1 1934 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 TMEM191CA6NGB0 347 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 CHURC1-FNTBB4DL54 471 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 CFDP00746 253 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 APRTP07741 180 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 POU2F2P09086 479 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 HSD17B1P14061 328 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 CHRM3P20309 590 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 PIK3CBP42338 1070 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 FOXK2Q01167 660 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 GPM6BQ13491 265 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 TATDN3Q17R31 274 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 LRRC38Q5VT99 294 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 DARS2Q6PI48 645 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 BEND4Q6ZU67 534 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 B3GNT8Q7Z7M8 397 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 FUNDC1Q8IVP5 155 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 DMRTC2Q8IXT2 367 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 ANKRD52Q8NB46 1076 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 BPIFB1Q8TDL5 484 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 VAT1Q99536 393 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 SLC30A2Q9BRI3 323 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 GPR63Q9BZJ6 419 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 ZNF518BQ9C0D4 1074 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 MRPL47Q9HD33 250 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 MCUBQ9NWR8 336 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 TRPS1Q9UHF7 1281 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 ZFR2Q9UPR6 939 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 PNMA8CA0A1B0GUJ8 204 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 OR2A25A4D2G3 310 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 WASHC1A8K0Z3 465 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 FXYD1O00168 92 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 PIRO00625 290 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 ABCD4O14678 606 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 SLC30A4O14863 429 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 MRPS14O60783 128 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 MPC2O95563 127 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 SBK3P0C264 359 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 PTAFRP25105 342 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 LTBRP36941 435 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 SMSP52788 366 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 NAGLUP54802 743 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 DAB2P98082 770 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 LRRC74AQ0VAA2 488 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 ZYG11AQ6WRX3 759 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 HACD2Q6Y1H2 254 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 MAMDC2Q7Z304 686 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 IFNEQ86WN2 208 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 GDPD1Q8N9F7 314 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 ARNTL2Q8WYA1 636 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 SORCS2Q96PQ0 1159 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 KCNS3Q9BQ31 491 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 DPCDQ9BVM2 203 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 MBD2Q9UBB5 411 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 ERVK-19Q9WJR5 959 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 FKBP7Q9Y680 259 aa9.03□□□□□ -0.96
SMARCAL1-202ENST00000358207 PQLC2LA1A4F0 135 aa9.02□□□□□ -0.97
SMARCAL1-202ENST00000358207 TTLL8A6PVC2 850 aa9.02□□□□□ -0.97
SMARCAL1-202ENST00000358207 EFCAB7A8K855 629 aa9.02□□□□□ -0.97
SMARCAL1-202ENST00000358207 M0R082 166 aa9.02□□□□□ -0.97
SMARCAL1-202ENST00000358207 ANGPTL1O95841 491 aa9.02□□□□□ -0.97
SMARCAL1-202ENST00000358207 CBX7O95931 251 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms