RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 CLDN9O95484 217 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 IFNA5P01569 189 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 IFNW1P05000 195 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 TSHRP16473 764 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 RAB28P51157 221 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 NFATC4Q14934 902 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 LPCAT4Q643R3 524 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 KCNIP4Q6PIL6 250 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 SYN2Q92777 582 aaPredicted RBP9.52□□□□□ -0.89
CHD3-202ENST00000358181 FUBP3Q96I24 572 aaKnown RBP eCLIP9.52□□□□□ -0.89
CHD3-202ENST00000358181 BARD1Q99728 777 aaKnown RBP9.52□□□□□ -0.89
CHD3-202ENST00000358181 DCLRE1BQ9H816 532 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 RAPGEFL1Q9UHV5 662 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 SH2B3Q9UQQ2 575 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 A0A1W2PPW3 197 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 PROM1O43490 865 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 PRAMEF1O95521 474 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 TGFB1P01137 390 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 POU3F4P49335 361 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 HABP2Q14520 560 aaPredicted RBP9.52□□□□□ -0.89
CHD3-202ENST00000358181 ZNF619Q8N2I2 560 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 IL17RCQ8NAC3 791 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 DGCR14Q96DF8 476 aaKnown RBP9.52□□□□□ -0.89
CHD3-202ENST00000358181 FCRL2Q96LA5 508 aaPredicted RBP9.52□□□□□ -0.89
CHD3-202ENST00000358181 LHX5Q9H2C1 402 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 TNFRSF19Q9NS68 423 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 KCNIP1Q9NZI2 227 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 MAFBQ9Y5Q3 323 aaPredicted RBP9.52□□□□□ -0.89
CHD3-202ENST00000358181 WIF1Q9Y5W5 379 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 DEPDC5O75140 1603 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 A0A087WUU8 490 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 PLK4O00444 970 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 AZIN1O14977 448 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 SSX4O60224 188 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 CCNCP24863 283 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 GSTM2P28161 218 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 PTENP60484 403 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 TRIM61Q5EBN2 209 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 TMEM214Q6NUQ4 689 aaKnown RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 CDHR3Q6ZTQ4 885 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 OR13C3Q8NGS6 347 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 TMEM203Q969S6 136 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 SCGB3A2Q96PL1 93 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 DUSP9Q99956 384 aaKnown RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 TIGARQ9NQ88 270 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 DDX20Q9UHI6 824 aaKnown RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 ZNF541Q9H0D2 1346 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 LOC102723532A0A0G2JNH3 316 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 KDM4FA0A1W2PPD8 638 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 SRRM3A6NNA2 597 aaPredicted RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 ZNF670-ZNF695F2Z2N8 137 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 RAB27BO00194 218 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 ARHGEF15O94989 841 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 SERPINA7P05543 415 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 ZBTB48P10074 688 aaPredicted RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 GRPRP30550 384 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 HES1Q14469 280 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 DECR1Q16698 335 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 TRMT5Q32P41 509 aaKnown RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 TMPRSS6Q8IU80 811 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 FBXW8Q8N3Y1 598 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 C22orf15Q8WYQ4 148 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 PEX13Q92968 403 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 OR5B12Q96R08 314 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 HAPLN3Q96S86 360 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 GPATCH1Q9BRR8 931 aaKnown RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 ZNF442Q9H7R0 627 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 GPR34Q9UPC5 381 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 E7ENX8 843 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 SLC34A2O95436 690 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 C8AP07357 584 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 AOC1P19801 751 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 OGDHQ02218 1023 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 PLA2G7Q13093 441 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 ABRAXAS2Q15018 415 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 ZFP1Q6P2D0 407 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 NET1Q7Z628 596 aaPredicted RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 DTX3Q8N9I9 347 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 OR4C15Q8NGM1 316 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 CPNE2Q96FN4 548 aaPredicted RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 PIP5K1AQ99755 562 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 NUDT15Q9NV35 164 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 ZNF705EA8MWA4 302 aaPredicted RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 ACKR2O00590 384 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 GRID2O43424 1007 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 LYPLA1O75608 230 aaPredicted RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 PRLP01236 227 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 MRPL3P09001 348 aaKnown RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 HOXB2P14652 356 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 FBLP22087 321 aaKnown RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 CRHBPP24387 322 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 MPIP34949 423 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 GNB2P62879 340 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 FGL2Q14314 439 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 AMZ2Q86W34 360 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 RAB43Q86YS6 212 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 CCDC107Q8WV48 283 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 HSPBAP1Q96EW2 488 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms