RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 CLPPQ16740 277 aaPredicted RBP24.34■■□□□ 1.49
SSBP3-202ENST00000357475 CLEC6AQ6EIG7 209 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 RBM44Q6ZP01 1051 aaKnown RBP24.34■■□□□ 1.49
SSBP3-202ENST00000357475 RNF175Q8N4F7 328 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 KLHL6Q8WZ60 621 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 DPYSL5Q9BPU6 564 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 ZNF768Q9H5H4 540 aaKnown RBP24.34■■□□□ 1.49
SSBP3-202ENST00000357475 TIMM22Q9Y584 194 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 DCDC2BA2VCK2 349 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 KCNK5O95279 499 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 ZBTB11O95625 1053 aaPredicted RBP24.33■■□□□ 1.49
SSBP3-202ENST00000357475 CAPN1P07384 714 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 SERPINB3P29508 390 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 SERPINB5P36952 375 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 PKNOX1P55347 436 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 C16orf72Q14CZ0 275 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 ATG16L1Q676U5 607 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 GRHL2Q6ISB3 625 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 ANKRD53Q8N9V6 530 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 WDR48Q8TAF3 677 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 FAM122AQ96E09 287 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 SOHLH2Q9NX45 425 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 FIS1Q9Y3D6 152 aa24.33■■□□□ 1.49
SSBP3-202ENST00000357475 A0A0J9YVX5 310 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 UGDHO60701 494 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 JUPP14923 745 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 NAA20P61599 178 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 GALNT1Q10472 559 aaPredicted RBP24.32■■□□□ 1.48
SSBP3-202ENST00000357475 ZRSR2Q15696 482 aaKnown RBP24.32■■□□□ 1.48
SSBP3-202ENST00000357475 SH2D4BQ5SQS7 431 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 HES3Q5TGS1 186 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 LIPJQ5W064 366 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 FRMPD2BQ6IN97 320 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 GRAMD1AQ96CP6 724 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 SLC41A2Q96JW4 573 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 AIF1LQ9BQI0 150 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 FARSBQ9NSD9 589 aaKnown RBP24.32■■□□□ 1.48
SSBP3-202ENST00000357475 PNPOQ9NVS9 261 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 THAP1Q9NVV9 213 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 ANKMY1Q9P2S6 941 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 TRPS1Q9UHF7 1281 aa24.32■■□□□ 1.48
SSBP3-202ENST00000357475 TCP11X1B4DZS4 312 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 OR1F1O43749 312 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 ANKRD34CP0C6C1 535 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 HGFP14210 728 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 HRH2P25021 359 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 PLA2G5P39877 138 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 MLLT3P42568 568 aaPredicted RBP24.31■■□□□ 1.48
SSBP3-202ENST00000357475 GABRA4P48169 554 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 HTR6P50406 440 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 INHBCP55103 352 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 RBBP5Q15291 538 aaKnown RBP24.31■■□□□ 1.48
SSBP3-202ENST00000357475 GGTA1PQ4G0N0 100 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 FAM47EQ6ZV65 393 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 RNF44Q7L0R7 432 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 VN1R5Q7Z5H4 357 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.31■■□□□ 1.482e-6■■■■■ 40.9
SSBP3-202ENST00000357475 DNAJC22Q8N4W6 341 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 MTFMTQ96DP5 389 aaKnown RBP24.31■■□□□ 1.48
SSBP3-202ENST00000357475 TCTN2Q96GX1 697 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 MACROD1Q9BQ69 325 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 EFCAB11Q9BUY7 163 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 EML4Q9HC35 981 aaKnown RBP24.31■■□□□ 1.48
SSBP3-202ENST00000357475 BTRCQ9Y297 605 aa24.31■■□□□ 1.48
SSBP3-202ENST00000357475 LOC105369274A0A096LPK9 316 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 LOC102723532A0A0G2JNH3 316 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 TRBC2A0A5B9 178 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 TOX3O15405 576 aaPredicted RBP24.3■■□□□ 1.48
SSBP3-202ENST00000357475 HYAL3O43820 417 aaPredicted RBP24.3■■□□□ 1.48
SSBP3-202ENST00000357475 MT-CO3P00414 261 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 FOLR1P15328 257 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 NELFEP18615 380 aaKnown RBP24.3■■□□□ 1.48
SSBP3-202ENST00000357475 PTPRBP23467 1997 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 NEK2P51955 445 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 HSD11B2P80365 405 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 TMIGD1Q6UXZ0 262 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 RGS9BPQ6ZS82 235 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 MARCH9Q86YJ5 346 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 OR4N4Q8N0Y3 316 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 CARFQ8N187 725 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 D2HGDHQ8N465 521 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 OR2A5Q96R48 311 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 HBEGFQ99075 208 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 APOBEC2Q9Y235 224 aaKnown RBP24.3■■□□□ 1.48
SSBP3-202ENST00000357475 STK38LQ9Y2H1 464 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 EZRP15311 586 aaKnown RBP24.3■■□□□ 1.48
SSBP3-202ENST00000357475 HNF4AP41235 474 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 CYP4F2P78329 520 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 MED27Q6P2C8 311 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 SCIMPQ6UWF3 145 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 DGLUCYQ7Z3D6 616 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 OR7G3Q8NG95 312 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 METTL6Q8TCB7 284 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 PDE7BQ9NP56 450 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 DLL3Q9NYJ7 618 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 MARCOQ9UEW3 520 aaPredicted RBP24.3■■□□□ 1.48
SSBP3-202ENST00000357475 RAP2CQ9Y3L5 183 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 PCDHGA4Q9Y5G9 962 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 PTGDR2Q9Y5Y4 395 aa24.3■■□□□ 1.48
SSBP3-202ENST00000357475 WDFY3Q8IZQ1 3526 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms