RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 FIGLAQ6QHK4 219 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 WDR74Q6RFH5 385 aaPredicted RBP3.86□□□□□ -1.79
LIG4-201ENST00000356922 TMPRSS11BQ86T26 416 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 PAQR7Q86WK9 346 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 ARHGEF39Q8N4T4 335 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 CDYL2Q8N8U2 506 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 BMPERQ8N8U9 685 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 ABHD11Q8NFV4 315 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 UBTD2Q8WUN7 234 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 GRAMD1AQ96CP6 724 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 MTERF1Q99551 399 aaKnown RBP3.86□□□□□ -1.79
LIG4-201ENST00000356922 CNOT10Q9H9A5 744 aaKnown RBP3.86□□□□□ -1.79
LIG4-201ENST00000356922 OPTCQ9UBM4 332 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 EPHA6Q9UF33 1036 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 FIS1Q9Y3D6 152 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 DNAJC15Q9Y5T4 150 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 MAP1BP46821 2468 aaKnown RBP3.86□□□□□ -1.79
LIG4-201ENST00000356922 PKD1L2Q7Z442 2459 aa3.86□□□□□ -1.79
LIG4-201ENST00000356922 A0A0G2JN53 185 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 ATP6AP2A0A1C7CYW4 349 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 ARHGAP10A1A4S6 786 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 OR2A25A4D2G3 310 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 SYCE1LA8MT33 242 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 C2orf74A8MZ97 194 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 STX16-NPEPL1H3BU86 382 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 ZNF195O14628 629 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 STX16O14662 325 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 SNNO75324 88 aaPredicted RBP3.85□□□□□ -1.79
LIG4-201ENST00000356922 ATP6AP2O75787 350 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 ZWINTO95229 277 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 KITP10721 976 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 CEACAM1P13688 526 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 PLA2G5P39877 138 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 EFNA3P52797 238 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 DNAJB13P59910 316 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 CYP4F2P78329 520 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 OCRLQ01968 901 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 CDC16Q13042 620 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 ISXQ2M1V0 245 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 SGO1Q5FBB7 561 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 XKR6Q5GH73 641 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 CAPN13Q6MZZ7 669 aaPredicted RBP3.85□□□□□ -1.79
LIG4-201ENST00000356922 NXPE4Q6UWF7 544 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 FAM47EQ6ZV65 393 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 OOSP2Q86WS3 158 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 KLHDC8AQ8IYD2 350 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 DNAJC22Q8N4W6 341 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 OR7G3Q8NG95 312 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 OR2T11Q8NH01 316 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 MAGEC3Q8TD91 643 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 NETO1Q8TDF5 533 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 AGAP11Q8TF27 550 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 DYDC1Q8WWB3 177 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 SLC5A11Q8WWX8 675 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 SLC41A2Q96JW4 573 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 GFM1Q96RP9 751 aaKnown RBP3.85□□□□□ -1.79
LIG4-201ENST00000356922 PLCD4Q9BRC7 762 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 MRPS30Q9NP92 439 aaKnown RBP3.85□□□□□ -1.79
LIG4-201ENST00000356922 LHX9Q9NQ69 397 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 SEMA5BQ9P283 1151 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 CCL27Q9Y4X3 112 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 ANGPTL3Q9Y5C1 460 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 PCDHB11Q9Y5F2 797 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 MN1Q10571 1320 aaPredicted RBP3.85□□□□□ -1.79
LIG4-201ENST00000356922 ATRXP46100 2492 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 RTCAO00442 366 aaKnown RBP3.85□□□□□ -1.79
LIG4-201ENST00000356922 KDM1AO60341 852 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 SMIM24O75264 130 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 RFPL3O75679 317 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 GBAP04062 536 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 RPN2P04844 631 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 GP1BAP07359 652 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 CAPN1P07384 714 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 EPB42P16452 691 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 NELFEP18615 380 aaKnown RBP3.85□□□□□ -1.79
LIG4-201ENST00000356922 CDH3P22223 829 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 HNRNPH1P31943 449 aaKnown RBP3.85□□□□□ -1.79
LIG4-201ENST00000356922 EPHA4P54764 986 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 GPLD1P80108 840 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 CBX1P83916 185 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 HMGCS1Q01581 520 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 PRKAA1Q13131 559 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 CAMK2BQ13554 666 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 KIR2DS3Q14952 304 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 PHF19Q5T6S3 580 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 HHATQ5VTY9 493 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 LCTLQ6UWM7 567 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 Q6ZSR9 355 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 ADCK2Q7Z695 626 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 CCDC91Q7Z6B0 441 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 UBE3DQ7Z6J8 389 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 SNX31Q8N9S9 440 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 OR4D9Q8NGE8 314 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 OR1L3Q8NH93 324 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 WDR20Q8TBZ3 569 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 CREB3L4Q8TEY5 395 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 PPP4R1Q8TF05 950 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 CKAP2Q8WWK9 683 aa3.85□□□□□ -1.79
LIG4-201ENST00000356922 SREK1Q8WXA9 508 aaKnown RBP3.85□□□□□ -1.79
LIG4-201ENST00000356922 KLHL6Q8WZ60 621 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms