RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 YOD1Q5VVQ6 348 aaPredicted RBP3.81□□□□□ -1.8
CNOT4-202ENST00000356162 BROXQ5VW32 411 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 KIAA1614Q5VZ46 1190 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 FCRL6Q6DN72 434 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 SULT1C3Q6IMI6 304 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 ZNF425Q6IV72 752 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 TLDC1Q6P9B6 456 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 MBOAT1Q6ZNC8 495 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 LRRC70Q7Z2Q7 622 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 LCA5Q86VQ0 697 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 C17orf64Q86WR6 236 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 GPSM1Q86YR5 675 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 CENPLQ8N0S6 344 aaPredicted RBP3.81□□□□□ -1.8
CNOT4-202ENST00000356162 C2orf73Q8N5S3 287 aaPredicted RBP3.81□□□□□ -1.8
CNOT4-202ENST00000356162 ESX1Q8N693 406 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 TTC29Q8NA56 475 aaPredicted RBP3.81□□□□□ -1.8
CNOT4-202ENST00000356162 PPFIBP2Q8ND30 876 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 OR2A1Q8NGT9 310 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 RHEBL1Q8TAI7 183 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 UHMK1Q8TAS1 419 aaKnown RBP3.81□□□□□ -1.8
CNOT4-202ENST00000356162 PROKR1Q8TCW9 393 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 ACMSDQ8TDX5 336 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 N4BP2L2Q92802 583 aaPredicted RBP3.81□□□□□ -1.8
CNOT4-202ENST00000356162 ZUFSPQ96AP4 578 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 PTERQ96BW5 349 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 MRRFQ96E11 262 aaKnown RBP3.81□□□□□ -1.8
CNOT4-202ENST00000356162 TSNARE1Q96NA8 513 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 LRFN5Q96NI6 719 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 ZNF285Q96NJ3 590 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 EGFL8Q99944 293 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 PLCD4Q9BRC7 762 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 PELI2Q9HAT8 420 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 APMAPQ9HDC9 416 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 FGF21Q9NSA1 209 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 WWOXQ9NZC7 414 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 RNF112Q9ULX5 631 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 SNX7Q9UNH6 387 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 SRPK3Q9UPE1 567 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 ACOT9Q9Y305 439 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 SUPT3HB4E1H0 165 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 E7EQ34 232 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 SUPT3HO75486 399 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 KIAA0754O94854 1291 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 TYK2P29597 1187 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 HSD17B3P37058 310 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 EIF2S3P41091 472 aaKnown RBP3.8□□□□□ -1.8
CNOT4-202ENST00000356162 REEP5Q00765 189 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 IRF9Q00978 393 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 PRDX1Q06830 199 aaKnown RBP3.8□□□□□ -1.8
CNOT4-202ENST00000356162 ABHD18Q0P651 414 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 TSTA3Q13630 321 aaPredicted RBP3.8□□□□□ -1.8
CNOT4-202ENST00000356162 SLC29A2Q14542 456 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 TGFBIQ15582 683 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 ERCC6LQ2NKX8 1250 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 DEFB110Q30KQ9 67 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 TECRLQ5HYJ1 363 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 TCTE1Q5JU00 501 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 THEMIS2Q5TEJ8 643 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 SUSD1Q6UWL2 747 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 C6orf15Q6UXA7 325 aaPredicted RBP3.8□□□□□ -1.8
CNOT4-202ENST00000356162 ZFAND4Q86XD8 727 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 DTX1Q86Y01 620 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 TMEM126BQ8IUX1 230 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 GPR135Q8IZ08 494 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 NLGN4XQ8N0W4 816 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 TBC1D19Q8N5T2 526 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 NLGN4YQ8NFZ3 816 aaPredicted RBP3.8□□□□□ -1.8
CNOT4-202ENST00000356162 OR1L3Q8NH93 324 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 STAG3L4Q8TBR4 150 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 KCTD4Q8WVF5 259 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 RHBDF1Q96CC6 855 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 MED8Q96G25 268 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 ATOH8Q96SQ7 321 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 CTRCQ99895 268 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 ZFYVE21Q9BQ24 234 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 SELENOSQ9BQE4 189 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 TMEM79Q9BSE2 394 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 DPH7Q9BTV6 452 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 EFHD1Q9BUP0 239 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 ULBP3Q9BZM4 244 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 SPRY4Q9C004 299 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 KLHL25Q9H0H3 589 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 VPS11Q9H270 941 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 CNOT10Q9H9A5 744 aaKnown RBP3.8□□□□□ -1.8
CNOT4-202ENST00000356162 FAM60AQ9NP50 221 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 TMEM184CQ9NVA4 438 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 EURLQ9NYK6 297 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 GPRC5BQ9NZH0 403 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.8□□□□□ -1.8
CNOT4-202ENST00000356162 SERTAD3Q9UJW9 196 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 PILRAQ9UKJ1 303 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 RAXQ9Y2V3 346 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 AP1M2Q9Y6Q5 423 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 V9GYY5 206 aaPredicted RBP3.8□□□□□ -1.8
CNOT4-202ENST00000356162 PCM1Q15154 2024 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 IGKV1-8A0A0C4DH67 115 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 FITM1A5D6W6 292 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 SRRM3A6NNA2 597 aaPredicted RBP3.8□□□□□ -1.8
CNOT4-202ENST00000356162 H3BMH7 237 aa3.8□□□□□ -1.8
CNOT4-202ENST00000356162 AGRPO00253 132 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms