RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CA8P35219 290 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 MAPKAPK2P49137 400 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 CDH12P55289 794 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 ELP6Q0PNE2 266 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 SLAMF1Q13291 335 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 LRIF1Q5T3J3 769 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 AGAP6Q5VW22 663 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 PRAMEF9Q5VWM5 478 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 TRIM46Q7Z4K8 759 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 FAM124AQ86V42 546 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 SYT12Q8IV01 421 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 DNAJC22Q8N4W6 341 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 KIAA1958Q8N8K9 716 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 OR6F1Q8NGZ6 308 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 FATE1Q969F0 183 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 AGAP4Q96P64 663 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 CNPPD1Q9BV87 410 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 PAQR5Q9NXK6 330 aaPredicted RBP9.81□□□□□ -0.84
PTPRA-203ENST00000356147 PSORS1C1Q9UIG5 152 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 SLC22A14Q9Y267 594 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 OARD1Q9Y530 152 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 ACSL4O60488 711 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 MTX2O75431 263 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 PTTG1O95997 202 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 KRT6AP02538 564 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 GBAP04062 536 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 KRT6BP04259 564 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 COX7A2P14406 83 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 ZNF7P17097 686 aaPredicted RBP9.81□□□□□ -0.84
PTPRA-203ENST00000356147 KRT6CP48668 564 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 RPIAP49247 311 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 RGS6P49758 472 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 CLCN4P51793 760 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 NKX3-2P78367 333 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 CACNG1Q06432 222 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 GANABQ14697 944 aaKnown RBP9.81□□□□□ -0.84
PTPRA-203ENST00000356147 TRIM60Q495X7 471 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 ZBTB2Q8N680 514 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 BEND7Q8N7W2 519 aaPredicted RBP9.81□□□□□ -0.84
PTPRA-203ENST00000356147 TRNT1Q96Q11 434 aaKnown RBP9.81□□□□□ -0.84
PTPRA-203ENST00000356147 FYTTD1Q96QD9 318 aaKnown RBP9.81□□□□□ -0.84
PTPRA-203ENST00000356147 SIGLEC11Q96RL6 698 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 COPS8Q99627 209 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 BCL7BQ9BQE9 202 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 TMEM246Q9BRR3 403 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 NMRK2Q9NPI5 230 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 MS4A12Q9NXJ0 267 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 CRLS1Q9UJA2 301 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 WBP11Q9Y2W2 641 aaKnown RBP9.81□□□□□ -0.84
PTPRA-203ENST00000356147 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 SAGE2PA6NJ88 616 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 NOTOA8MTQ0 251 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 MAGEB17A8MXT2 336 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 H3BQ06 376 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 TNFRSF11BO00300 401 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 EPN2O95208 641 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 CD160O95971 181 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 C9P02748 559 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 CDK1P06493 297 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 FEN1P39748 380 aaKnown RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 SOX3P41225 446 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 SLC15A1P46059 708 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 HTR3AP46098 478 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 ZNF177Q13360 481 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 CHRNA6Q15825 494 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 UGT8Q16880 541 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 ZFP69Q49AA0 526 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 TSPAN33Q86UF1 283 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 CARNMT1Q8N4J0 409 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 FOXJ1Q92949 421 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 USP7Q93009 1102 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 DEPDC7Q96QD5 511 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 IL4I1Q96RQ9 567 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 CCM2Q9BSQ5 444 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 MAGEH1Q9H213 219 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 IL26Q9NPH9 171 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 SPASTQ9UBP0 616 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 RIMKLBQ9ULI2 386 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 TBC1D24Q9ULP9 559 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 A0A0C4DFX4 3053 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 CLCA1A8K7I4 914 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 H3BNC9 293 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 EBLN1P0CF75 366 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 DGKAP23743 735 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 GATMP50440 423 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 UGT2B15P54855 530 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 RHOAP61586 193 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 BAK1Q16611 211 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 PTCHD3Q3KNS1 767 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 TBRG1Q3YBR2 411 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 INO80DQ53TQ3 878 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 NOXRED1Q6NXP6 359 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 NEK5Q6P3R8 708 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 LINC00299Q6ZSB3 139 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 MRPL10Q7Z7H8 261 aaKnown RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 SLC44A2Q8IWA5 706 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 TRIM48Q8IWZ4 208 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 LMNTD1Q8N9Z9 388 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 GPR156Q8NFN8 814 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 GPR151Q8TDV0 419 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms