RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 OR1F1O43749 312 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 DXOO77932 396 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 NTRK1P04629 796 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 MSL3P1P0C860 447 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 C1QTNF9P0C862 333 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 ATXN8OSP0DMR3 200 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 C1GALT1C1LP0DN25 315 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 CD22P20273 847 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 PRKAA2P54646 552 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 ITGA1P56199 1179 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 HERVK_113P63132 956 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 CHIT1Q13231 466 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 MPP2Q14168 576 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 DOC2AQ14183 400 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 ZNF678Q5SXM1 525 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 FAM219BQ5XKK7 198 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 TMEM126BQ8IUX1 230 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 C10orf107Q8IVU9 208 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 ZNF655Q8N720 491 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 CDK15Q96Q40 435 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 MECRQ9BV79 373 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 TMEM121BQ9BXQ6 578 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 ERVK-6Q9BXR3 956 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 ASPSCR1Q9BZE9 553 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 ULBP3Q9BZM4 244 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 STMN4Q9H169 189 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 NOL11Q9H8H0 719 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 IPPKQ9H8X2 491 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 PELI2Q9HAT8 420 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 SEMA4BQ9NPR2 832 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 GEMIN8Q9NWZ8 242 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 GPRC5BQ9NZH0 403 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 COPG2Q9UBF2 871 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 TEX51A0A1B0GUA7 166 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 NVLO15381 856 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 SCRG1O75711 98 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 KIAA0754O94854 1291 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 SUPT7LO94864 414 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 RPS17P08708 135 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 IRF8Q02556 426 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 SLBPQ14493 270 aaKnown RBP eCLIP17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 PCLAFQ15004 111 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 UNC50Q53HI1 259 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 WASHC2DQ5SRD0 308 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 ATG9BQ674R7 924 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 ZFAND4Q86XD8 727 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 MYLK4Q86YV6 388 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 LSMEM2Q8N112 164 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 CCNYL1Q8N7R7 359 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 OR52B6Q8NGF0 335 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 TLCD1Q96CP7 247 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 PCDHGA3Q9Y5H0 932 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 A0A1B0GTL3 188 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 OR7A17O14581 309 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 P2RX6O15547 441 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 KATNA1O75449 491 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 IMPDH1P20839 514 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 GRK3P35626 688 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 ARL1P40616 181 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 CYP4F2P78329 520 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 REEP5Q00765 189 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 RBBP5Q15291 538 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 HKDC1Q2TB90 917 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 TTMPQ5BVD1 217 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 ADNP2Q6IQ32 1131 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 IGF2-ASQ6U949 168 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 VN1R4Q7Z5H5 301 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 SLC22A9Q8IVM8 553 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 GPR135Q8IZ08 494 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 SLC38A9Q8NBW4 561 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 RDH11Q8TC12 318 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 ZNF483Q8TF39 744 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 AIF1LQ9BQI0 150 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 CAPS2Q9BXY5 557 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 MLXIPLQ9NP71 852 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 THSD1Q9NS62 852 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 ACTL7BQ9Y614 415 aa17.09■□□□□ 0.33
PDLIM7-202ENST00000355841 ZSCAN9O15535 394 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 ZNF749O43361 778 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 WFS1O76024 890 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 STK17BO94768 372 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 ALDH3A1P30838 453 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 CCR10P46092 362 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 NAGLUP54802 743 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 RPS15AP62244 130 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 SNRPNP63162 240 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 TBC1D25Q3MII6 688 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 DTWD1Q8N5C7 304 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 CSNK1A1LQ8N752 337 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 ANKRD53Q8N9V6 530 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 TRPC4APQ8TEL6 797 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 PPP4R1Q8TF05 950 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 ATP6V1E2Q96A05 226 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 RERGQ96A58 199 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 ACTR8Q9H981 624 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 SSU72Q9NP77 194 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 OXSMQ9NWU1 459 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 PCDHGA7Q9Y5G6 932 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 PCDHGA4Q9Y5G9 962 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms