RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 DAG1Q14118 895 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 ANKRD26P1Q6NSI1 321 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 AGTRAPQ6RW13 159 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 CEACAM20Q6UY09 585 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 PIGWQ7Z7B1 504 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 METTL27Q8N6F8 245 aaPredicted RBP12.85□□□□□ -0.35
SCN8A-202ENST00000355133 NAXEQ8NCW5 288 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 EURLQ9NYK6 297 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 FNIP2Q9P278 1114 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 MED1Q15648 1581 aaPredicted RBP12.85□□□□□ -0.35
SCN8A-202ENST00000355133 NPIPA5E9PKD4 350 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 SOD2P04179 222 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 HMGN1P05114 100 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 KLK3P07288 261 aaPredicted RBP12.85□□□□□ -0.35
SCN8A-202ENST00000355133 CKMT2P17540 419 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 RORCP51449 518 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 PAFAH1B3Q15102 231 aaKnown RBP12.85□□□□□ -0.35
SCN8A-202ENST00000355133 PRRT3Q5FWE3 981 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 KCNA7Q96RP8 456 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 Q9N2J8 555 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 TMEM248Q9NWD8 314 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 NPIPA1Q9UND3 350 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 TACSTD2P09758 323 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 ACSL1P33121 698 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 MERTKQ12866 999 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 SEMA3AQ14563 771 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 ABCA11PQ4W5N1 156 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 GPRC6AQ5T6X5 926 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 CANT1Q8WVQ1 401 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 TMEM203Q969S6 136 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 METTL7AQ9H8H3 244 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 CRTAC1Q9NQ79 661 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 MGAT4AQ9UM21 535 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 PCDHGB5Q9Y5G0 923 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 H0YGN5 161 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 EIF1AYO14602 144 aaKnown RBP12.84□□□□□ -0.35
SCN8A-202ENST00000355133 TBX1O43435 398 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 GSTT2BP0CG30 244 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 PTNP21246 168 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 GLIS1Q8NBF1 620 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 PHOSPHO1Q8TCT1 267 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 ZIM2Q9NZV7 527 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 B4GALT6Q9UBX8 382 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 GABRQQ9UN88 632 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 FAM170BA6NMN3 283 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 CHP2O43745 196 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 SRPRAP08240 638 aaKnown RBP12.84□□□□□ -0.35
SCN8A-202ENST00000355133 ARRB1P49407 418 aaPredicted RBP12.84□□□□□ -0.35
SCN8A-202ENST00000355133 CDK6Q00534 326 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 MEF2AQ02078 507 aaPredicted RBP12.84□□□□□ -0.35
SCN8A-202ENST00000355133 GALNT2Q10471 571 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 ARFRP1Q13795 201 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 DECR1Q16698 335 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 MSS51Q4VC12 460 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 SPATC1Q76KD6 591 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 GPALPP1Q8IXQ4 340 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 YIPF7Q8N8F6 280 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 C1orf216Q8TAB5 229 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 FBXL18Q96ME1 805 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 SLC29A3Q9BZD2 475 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 OAZ3Q9UMX2 235 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 NOX1Q9Y5S8 564 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 HYKKA2RU49 373 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 PRAMEF11O60813 436 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 F2P00734 622 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 OAS1P00973 400 aaKnown RBP12.84□□□□□ -0.35
SCN8A-202ENST00000355133 ITGB1P05556 798 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 FAM163BP0C2L3 166 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 G6PDP11413 515 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 POLR2CP19387 275 aaPredicted RBP12.84□□□□□ -0.35
SCN8A-202ENST00000355133 GPX6P59796 221 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 PITPNAQ00169 270 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.84□□□□□ -0.35
SCN8A-202ENST00000355133 TMIGD1Q6UXZ0 262 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 SGCDQ92629 289 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 TMBIM1Q969X1 311 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 LDAHQ9H6V9 325 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 ANKRA2Q9H9E1 313 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 DNAJB4Q9UDY4 337 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 GLOD5A6NK44 160 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 GRID2O43424 1007 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 CD36P16671 472 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 HERC3Q15034 1050 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 NPTX1Q15818 432 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 ACSBG2Q5FVE4 666 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 C14orf80Q86SX3 495 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 DCAF4L2Q8NA75 395 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 OR8H1Q8NGG4 311 aa12.84□□□□□ -0.35
SCN8A-202ENST00000355133 A0A1W2PRQ8 180 aa12.83□□□□□ -0.36
SCN8A-202ENST00000355133 PEX12O00623 359 aa12.83□□□□□ -0.36
SCN8A-202ENST00000355133 DIRAS1O95057 198 aa12.83□□□□□ -0.36
SCN8A-202ENST00000355133 PIM1P11309 404 aaPredicted RBP12.83□□□□□ -0.36
SCN8A-202ENST00000355133 XRCC1P18887 633 aaPredicted RBP12.83□□□□□ -0.36
SCN8A-202ENST00000355133 AKR1D1P51857 326 aa12.83□□□□□ -0.36
SCN8A-202ENST00000355133 FCHO2Q0JRZ9 810 aa12.83□□□□□ -0.36
SCN8A-202ENST00000355133 CMTR2Q8IYT2 770 aaKnown RBP12.83□□□□□ -0.36
SCN8A-202ENST00000355133 NATD1Q8N6N6 113 aa12.83□□□□□ -0.36
SCN8A-202ENST00000355133 CCDC115Q96NT0 180 aa12.83□□□□□ -0.36
SCN8A-202ENST00000355133 NSUN3Q9H649 340 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms