RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 GOLGA4Q13439 2230 aaKnown RBP9.1□□□□□ -0.95
SMG6-202ENST00000354901 ANKRD66B4E2M5 251 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 TSPAN12O95859 305 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 ATF6P18850 670 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 CORO1AP31146 461 aaKnown RBP9.1□□□□□ -0.95
SMG6-202ENST00000354901 SLC11A2P49281 568 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 ERVK-8P63133 956 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 AP5B1Q2VPB7 878 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 RFTN2Q52LD8 501 aaPredicted RBP9.1□□□□□ -0.95
SMG6-202ENST00000354901 ESCO2Q56NI9 601 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 ZMAT1Q5H9K5 638 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 ZNF648Q5T619 568 aaPredicted RBP9.1□□□□□ -0.95
SMG6-202ENST00000354901 PTRHD1Q6GMV3 140 aaKnown RBP9.1□□□□□ -0.95
SMG6-202ENST00000354901 CARNMT1Q8N4J0 409 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 PHF21AQ96BD5 680 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 DUS3LQ96G46 650 aaKnown RBP9.1□□□□□ -0.95
SMG6-202ENST00000354901 SLC52A3Q9NQ40 469 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 WASH6PQ9NQA3 447 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 AFF4Q9UHB7 1163 aaKnown RBP9.1□□□□□ -0.95
SMG6-202ENST00000354901 LOC100130705A0A1B0GUX0 176 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 SLC38A8A6NNN8 435 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 TEX46H3BTG2 121 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 E2F3O00716 465 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 VNN2O95498 520 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 HOXB8P17481 243 aaPredicted RBP9.1□□□□□ -0.95
SMG6-202ENST00000354901 RPS3P23396 243 aaKnown RBP eCLIP9.1□□□□□ -0.95
SMG6-202ENST00000354901 CFL1P23528 166 aaKnown RBP9.1□□□□□ -0.95
SMG6-202ENST00000354901 HRH2P25021 359 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 GRK3P35626 688 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 ZFP36L2P47974 494 aaKnown RBP9.1□□□□□ -0.95
SMG6-202ENST00000354901 SLC11A1P49279 550 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 ABRAXAS2Q15018 415 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 DEFB115Q30KQ5 88 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 CES5AQ6NT32 575 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 FUT10Q6P4F1 479 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 SPATA19Q7Z5L4 167 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 RNF180Q86T96 592 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 GLCCI1Q86VQ1 547 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 FAM217AQ8IXS0 508 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 YIPF7Q8N8F6 280 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 OR4F6Q8NGB9 312 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 CHAC2Q8WUX2 184 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 FBXW5Q969U6 566 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 C1QTNF6Q9BXI9 259 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 MAGEH1Q9H213 219 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 ERVMER34-1Q9H9K5 563 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 NECTIN3Q9NQS3 549 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 CREBZFQ9NS37 354 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 SRRDQ9UH36 339 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 TRAV19A0A0A6YYK7 116 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 LEUTXA8MZ59 168 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 K7ERQ8 282 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 DFNA5O60443 496 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 MLYCDO95822 493 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 EVI2BP34910 448 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 OR1D2P34982 312 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 TTPAP49638 278 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 BLVRAP53004 296 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 CAP1Q01518 475 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 C19orf57Q0VDD7 668 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 STARD3Q14849 445 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 C5orf22Q49AR2 442 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 FLYWCH1Q4VC44 716 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 GPAT3Q53EU6 434 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 ARSKQ6UWY0 536 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 MBOAT1Q6ZNC8 495 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 DTWD1Q8N5C7 304 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 DBF4BQ8NFT6 615 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 CIPCQ9C0C6 399 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 IPPKQ9H8X2 491 aa9.1□□□□□ -0.95
SMG6-202ENST00000354901 THSD7BQ9C0I4 1608 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 H0YAE9 185 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 WWP2O00308 870 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 EEDO75530 441 aaKnown RBP9.09□□□□□ -0.95
SMG6-202ENST00000354901 IGLV3-27P01718 113 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 ALPLP05186 524 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 NUDT6P53370 316 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 IL18R1Q13478 541 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 SPDYE7PQ495Y7 208 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 GTDC1Q4AE62 458 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 C6orf132Q5T0Z8 1188 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 OR10A6Q8NH74 314 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 HERVK_113Q902F9 699 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 SH3KBP1Q96B97 665 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 OR51E2Q9H255 320 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 POPDC3Q9HBV1 291 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 SLAMF7Q9NQ25 335 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 VWA8A3KMH1 1905 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 PIKFYVEQ9Y2I7 2098 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 TCRBV5S2A0A599 114 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 COCHO43405 550 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 RGS10O43665 173 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 VPS4BO75351 444 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 M6PRP20645 277 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 SSTR4P31391 388 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 CA5AP35218 305 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 MAGEA11P43364 429 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 SMSP52788 366 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 PTPN5P54829 565 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 RHOAP61586 193 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms