RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 C7orf72A4D263 438 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 RFXAPO00287 272 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 SERPIND1P05546 499 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 PPP3CBP16298 524 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 GADD45AP24522 165 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 KIR3DL1P43629 444 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 MTPNP58546 118 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 CHRNA6Q15825 494 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 DPY19L1Q2PZI1 675 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 FAM180BQ6P0A1 224 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 GTPBP8Q8N3Z3 284 aaPredicted RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 CELF2-AS1Q8N7Q2 184 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 OR10G2Q8NGC3 310 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 OR4Q3Q8NH05 313 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 PCDH19Q8TAB3 1148 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 SELENOMQ8WWX9 145 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 DCLRE1CQ96SD1 692 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 FAM126AQ9BYI3 521 aaPredicted RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 CST11Q9H112 138 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 MEAF6Q9HAF1 191 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 AKIP1Q9NQ31 210 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 PCDHB8Q9UN66 801 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 PRORSD1PA6NEY8 169 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 F5H0A9 414 aaPredicted RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 PIP5K1BO14986 540 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 SSX4O60224 188 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 BMP7P18075 431 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 HTR1BP28222 390 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 RAP2BP61225 183 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 PFKPQ01813 784 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 GRM3Q14832 879 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 INAVAQ3KP66 663 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 KLHL24Q6TFL4 600 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 FAM124AQ86V42 546 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 GALNT13Q8IUC8 556 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 SNX29P2Q8IUI4 249 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 CD300LFQ8TDQ1 290 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 FCRL1Q96LA6 429 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 CACNG6Q9BXT2 260 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 NAA50Q9GZZ1 169 aaKnown RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 ZFP14Q9HCL3 533 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 SMCO4Q9NRQ5 59 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 MS4A12Q9NXJ0 267 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 TAS2R10Q9NYW0 307 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 TJP2Q9UDY2 1190 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 ZNF639Q9UID6 485 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 MINPP1Q9UNW1 487 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 PCDHB5Q9Y5E4 795 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 PCDHGA7Q9Y5G6 932 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 A6NCN8 305 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 NAP1L6A6NFF2 107 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 TGFB1I1O43294 461 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 MICAL2O94851 1124 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 PIGRP01833 764 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 RAF1P04049 648 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 ITGAMP11215 1152 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 CYP2A6P11509 494 aaPredicted RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 MAGEA11P43364 429 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 GTF2BQ00403 316 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 TEKQ02763 1124 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 PIGFQ07326 219 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 ACSM2AQ08AH3 577 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 POU4F2Q12837 409 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 KLF1Q13351 362 aaPredicted RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 GRIN2CQ14957 1233 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 ACSM2BQ68CK6 577 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 SLC25A25Q6KCM7 469 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 LINC00471Q8N535 108 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 TMEM102Q8N9M5 508 aaPredicted RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 TMEM185AQ8NFB2 350 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 OR6S1Q8NH40 331 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 CNOT9Q92600 299 aaKnown RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 RRNAD1Q96FB5 475 aaKnown RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 PPP1R16BQ96T49 567 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 AKTIPQ9H8T0 292 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 AMBNQ9NP70 447 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 MARK1Q9P0L2 795 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 ZFR2Q9UPR6 939 aaKnown RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 INTS1Q8N201 2190 aaKnown RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 PIKFYVEQ9Y2I7 2098 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 NUDT19A8MXV4 375 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 MEN1O00255 615 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 CDK2AP1O14519 115 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 RAB36O95755 333 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 MAGEA3P43357 314 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 RAB8AP61006 207 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 SNTB2Q13425 540 aaKnown RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 SEMA5AQ13591 1074 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 DDX39BQ13838 428 aaKnown RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 COL9A3Q14050 684 aaPredicted RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 ARHGEF7Q14155 803 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 RFTN2Q52LD8 501 aaPredicted RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 MEDAGQ5VYS4 303 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 CFAP161Q6P656 301 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 OR2T11Q8NH01 316 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 SLC2A14Q8TDB8 520 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 CEP41Q9BYV8 373 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 MDC1Q14676 2089 aaKnown RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 NCOR1O75376 2440 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms