RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 TXNL4AP83876 142 aaKnown RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 FOLH1Q04609 750 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 ABHD18Q0P651 414 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 OR4D1Q15615 310 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 SLC5A9Q2M3M2 681 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 CXorf57Q6NSI4 855 aaKnown RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 SYVN1Q86TM6 617 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 OR8J3Q8NGG0 315 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 PIH1D2Q8WWB5 315 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 KLK6Q92876 244 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 REXO5Q96IC2 774 aaKnown RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 CDK15Q96Q40 435 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 ZNF395Q9H8N7 513 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 RNF11Q9Y3C5 154 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 A0A1W2PRB8 838 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 TMEM233B4DJY2 109 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 TOP3BO95985 862 aaKnown RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 NR1H2P55055 460 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 MRPS21P82921 87 aaKnown RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 LARS2Q15031 903 aaKnown RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 INAVAQ3KP66 663 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 DENND5AQ6IQ26 1287 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 KLHL17Q6TDP4 642 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 AKAP14Q86UN6 197 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 OFCC1Q8IZS5 231 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 DTD2Q96FN9 168 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 TRNAU1APQ9NX07 287 aaKnown RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 GMPPBQ9Y5P6 360 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 KLHL18O94889 574 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 TIMP2P16035 220 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 ZNF234Q14588 700 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 ALG11Q2TAA5 492 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 BROXQ5VW32 411 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 RALGPS2Q86X27 583 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-201ENST00000350148 LRRC20Q8TCA0 184 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 MYDGFQ969H8 173 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 MOAP1Q96BY2 351 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 KLHDC7BQ96G42 594 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 MTERF1Q99551 399 aaKnown RBP11.79□□□□□ -0.52
SMAD9-201ENST00000350148 POLR1BQ9H9Y6 1135 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 DNAJB9Q9UBS3 223 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 CDV3Q9UKY7 258 aaKnown RBP11.79□□□□□ -0.52
SMAD9-201ENST00000350148 AK5Q9Y6K8 562 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 CCDC182A6NF36 153 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 RPS17P08708 135 aaKnown RBP11.79□□□□□ -0.52
SMAD9-201ENST00000350148 POU2F2P09086 479 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 CCNYL3P0C7X3 344 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 HLA-FP30511 346 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 SPIBQ01892 262 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 BNC1Q01954 994 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 DUSP6Q16828 381 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 RSPO2Q6UXX9 243 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-201ENST00000350148 CLEC14AQ86T13 490 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 NR4A3Q92570 626 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 RORBQ92753 470 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 PYCR2Q96C36 320 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 LRCH3Q96II8 777 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 SLC35G5Q96KT7 338 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 MARCH7Q9H992 704 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 PELI2Q9HAT8 420 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 PIAS3Q9Y6X2 628 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 A0A1W2PP55 124 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 A0A1W2PQU0 124 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 HTRA2O43464 458 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-201ENST00000350148 MATN4O95460 622 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 ALOX5P09917 674 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 CSNK2A2P19784 350 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-201ENST00000350148 MPIP34949 423 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 USP39Q53GS9 565 aaKnown RBP11.79□□□□□ -0.52
SMAD9-201ENST00000350148 IRAK1BP1Q5VVH5 260 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 ANKRD54Q6NXT1 300 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 PGBD5Q8N414 524 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 C1orf52Q8N6N3 182 aaKnown RBP11.79□□□□□ -0.52
SMAD9-201ENST00000350148 OR52L1Q8NGH7 329 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 SLC38A2Q96QD8 506 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 EBPLQ9BY08 206 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 CLN6Q9NWW5 311 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 TAC3Q9UHF0 121 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 OR10H1Q9Y4A9 318 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 BCAS2O75934 225 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-201ENST00000350148 FOSL1P15407 271 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 HMGCS1Q01581 520 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 ACVR1Q04771 509 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 TIMM50Q3ZCQ8 353 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 ALG1LQ6GMV1 187 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 ZNF852Q6ZMS4 543 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 CCDC81Q6ZN84 652 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 BNIPLQ7Z465 357 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 GPR149Q86SP6 731 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 TSPAN33Q86UF1 283 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 PPM1HQ9ULR3 514 aa11.79□□□□□ -0.52
SMAD9-201ENST00000350148 H3BN98 237 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 AREL1O15033 823 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 MED26O95402 600 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 IFNW1P05000 195 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 CPN2P22792 545 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 MSX2P35548 267 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-201ENST00000350148 STX4Q12846 297 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 ZNF77Q15935 545 aa11.78□□□□□ -0.52
SMAD9-201ENST00000350148 NRF1Q16656 503 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms