RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 KEAP1Q14145 624 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 SOWAHCQ53LP3 525 aaPredicted RBP17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 XKR6Q5GH73 641 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 KIAA1614Q5VZ46 1190 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 METTL2BQ6P1Q9 378 aaKnown RBP17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 TSEN54Q7Z6J9 526 aaKnown RBP17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 ENTHD1Q8IYW4 607 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 OR6Q1Q8NGQ2 317 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 OR52J3Q8NH60 311 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 MRPL9Q9BYD2 267 aaKnown RBP17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 GABARAPL1Q9H0R8 117 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 BRD9Q9H8M2 597 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 SLC22A1O15245 554 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 GBAP04062 536 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 LIPAP38571 399 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 CBLL1Q75N03 491 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 GAREM2Q75VX8 874 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 EIF3MQ7L2H7 374 aaKnown RBP17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 NAGSQ8N159 534 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 GPR156Q8NFN8 814 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 TRMT2BQ96GJ1 504 aaKnown RBP17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 C7orf34Q96L11 122 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 SAMD11Q96NU1 681 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 APOL4Q9BPW4 351 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 EPS8L2Q9H6S3 715 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 REEP1Q9H902 201 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 FZD4Q9ULV1 537 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 M0R129 80 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 GCM2O75603 506 aaPredicted RBP17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 ATP1B2P14415 290 aaPredicted RBP17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 OR1E2P47887 323 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 DOC2AQ14183 400 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 DGUOKQ16854 277 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 HKDC1Q2TB90 917 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 GGTA1PQ4G0N0 100 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 TSPYL5Q86VY4 417 aaPredicted RBP17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 MED8Q96G25 268 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 SLIRPQ9GZT3 109 aaKnown RBP17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 RLIMQ9NVW2 624 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 VPS29Q9UBQ0 182 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 TESMINQ9Y4I5 508 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 TTC34A8MYJ7 566 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 GFYI3L273 518 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 PCDH7O60245 1069 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 JUPP14923 745 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 GABRR2P28476 465 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 HLA-FP30511 346 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 TGFBR2P37173 567 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 TRPC1P48995 793 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 EIF2B2P49770 351 aaKnown RBP17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 NUDT6P53370 316 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 GAB1Q13480 694 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 HIST2H2ACQ16777 129 aaPredicted RBP17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 ZNF852Q6ZMS4 543 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 FAM124AQ86V42 546 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 RNF168Q8IYW5 571 aaPredicted RBP17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 ELMO1Q92556 727 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 ASPSCR1Q9BZE9 553 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 RNF167Q9H6Y7 350 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 ZBTB20Q9HC78 741 aaPredicted RBP17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 NECTIN3Q9NQS3 549 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 RAPGEFL1Q9UHV5 662 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 SLC6A14Q9UN76 642 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 PCDHGA6Q9Y5G7 932 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 TMEM221A6NGB7 291 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 NUAK1O60285 661 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 PQBP1O60828 265 aaKnown RBP17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 DNAJB5O75953 348 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 ARHGEF15O94989 841 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 MAPK1P28482 360 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 RRM2P31350 389 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 KCNJ10P78508 379 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 SP3Q02447 781 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 CAMK2GQ13555 558 aaPredicted RBP17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 NAE1Q13564 534 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 CARTPTQ16568 116 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 ASTLQ6HA08 431 aaPredicted RBP17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 RUBCNLQ9H714 662 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 TRIM17Q9Y577 477 aa17.48■□□□□ 0.39
PTP4A3-202ENST00000349124 THSD7BQ9C0I4 1608 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 MYOFQ9NZM1 2061 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 C8GP07360 202 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 PRPH2P23942 346 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 SLC19A1P41440 591 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 PREPP48147 710 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 SPINT3P49223 89 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 CRISP3P54108 245 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 POM121L1PQ3SYA9 428 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 C1orf52Q8N6N3 182 aaKnown RBP17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 OR4K3Q96R72 315 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 LYSMD1Q96S90 227 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 TMEM121BQ9BXQ6 578 aaPredicted RBP17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 WDR12Q9GZL7 423 aaKnown RBP17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 RPS6KA6Q9UK32 745 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 PAIP2BQ9ULR5 123 aaKnown RBP17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 RNF6Q9Y252 685 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 TMED5Q9Y3A6 229 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 IGLV3-16A0A075B6K0 115 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms