RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 MDGA1Q8NFP4 955 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 UBASH3BQ8TF42 649 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 LINC01599Q8WXQ3 324 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 NACC2Q96BF6 587 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 PITX2Q99697 317 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 ATP13A2Q9NQ11 1180 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 TIGARQ9NQ88 270 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 TAS2R16Q9NYV7 291 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 HOXD9P28356 352 aaPredicted RBP18.07■□□□□ 0.48
SCARF1-202ENST00000348987 HMGCS1Q01581 520 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 CTXN3Q4LDR2 81 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 ANKRD46Q86W74 232 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 DNAJC22Q8N4W6 341 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 GPR151Q8TDV0 419 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 SEPT5Q99719 369 aaPredicted RBP18.07■□□□□ 0.48
SCARF1-202ENST00000348987 SPON2Q9BUD6 331 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 BBS2Q9BXC9 721 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 NARFLQ9H6Q4 476 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 RNF186Q9NXI6 227 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 SPASTQ9UBP0 616 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 TRBV5-3A0A0A0MS03 114 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 TRAPPC2P0DI81 140 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 TRAPPC2BP0DI82 140 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 SLC6A4P31645 630 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 CSNK2BP67870 215 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 MBTPS1Q14703 1052 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 PLPP6Q8IY26 295 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 LSMEM1Q8N8F7 131 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 TBC1D20Q96BZ9 403 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 FUBP3Q96I24 572 aaKnown RBP eCLIP18.07■□□□□ 0.48
SCARF1-202ENST00000348987 GPR62Q9BZJ7 368 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 MAT2BQ9NZL9 334 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 ZNF490Q9ULM2 529 aaPredicted RBP18.07■□□□□ 0.48
SCARF1-202ENST00000348987 SAMD4AQ9UPU9 718 aaKnown RBP18.07■□□□□ 0.48
SCARF1-202ENST00000348987 CFL2Q9Y281 166 aa18.07■□□□□ 0.48
SCARF1-202ENST00000348987 A0A1W2PQ09 198 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 TMEM88BA6NKF7 163 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 OR7A17O14581 309 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 FFAR3O14843 346 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 GPR42O15529 346 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 TSPAN12O95859 305 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 C1QCP02747 245 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 IL6P05231 212 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 FABP3P05413 133 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 M6PRP20645 277 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 RPS24P62847 133 aaKnown RBP18.06■□□□□ 0.48
SCARF1-202ENST00000348987 EFR3AQ14156 821 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 TTC9Q92623 222 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 HRASLS5Q96KN8 279 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 RAD18Q9NS91 495 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 THUMPD1Q9NXG2 353 aaKnown RBP18.06■□□□□ 0.48
SCARF1-202ENST00000348987 V9GYH0 126 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 B8ZZF3 427 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 NIPSNAP2O75323 286 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 FKBP9O95302 570 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 IGLV3-27P01718 113 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 RPS5P46782 204 aaKnown RBP18.06■□□□□ 0.48
SCARF1-202ENST00000348987 ZNF140P52738 457 aaPredicted RBP18.06■□□□□ 0.48
SCARF1-202ENST00000348987 FAPQ12884 760 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 SLC14A1Q13336 389 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 PTPRNQ16849 979 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 PSAPL1Q6NUJ1 521 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 ZNF551Q7Z340 670 aaPredicted RBP18.06■□□□□ 0.48
SCARF1-202ENST00000348987 CACTIN-AS1Q8N1I8 211 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 UBE2J2Q8N2K1 259 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 STX19Q8N4C7 294 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 CPPED1Q9BRF8 314 aaPredicted RBP18.06■□□□□ 0.48
SCARF1-202ENST00000348987 TSEN34Q9BSV6 310 aaKnown RBP18.06■□□□□ 0.48
SCARF1-202ENST00000348987 INPP5KQ9BT40 448 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 SMURF1Q9HCE7 757 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 BPIFA1Q9NP55 256 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 FARSBQ9NSD9 589 aaKnown RBP18.06■□□□□ 0.48
SCARF1-202ENST00000348987 CCL27Q9Y4X3 112 aa18.06■□□□□ 0.48
SCARF1-202ENST00000348987 TLR5O60602 858 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 VNN2O95498 520 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 OGNP20774 298 aaKnown RBP18.05■□□□□ 0.48
SCARF1-202ENST00000348987 TACR2P21452 398 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 UQCRC1P31930 480 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 IL12RB1P42701 662 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 SNRPD2P62316 118 aaKnown RBP18.05■□□□□ 0.48
SCARF1-202ENST00000348987 ZNF79Q15937 498 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 TRIM71Q2Q1W2 868 aaKnown RBP18.05■□□□□ 0.48
SCARF1-202ENST00000348987 GOLGA7Q7Z5G4 137 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 NKAPQ8N5F7 415 aaKnown RBP18.05■□□□□ 0.48
SCARF1-202ENST00000348987 LINGO1Q96FE5 620 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 DYRK4Q9NR20 520 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 ABCB8Q9NUT2 735 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 PCDHGC4Q9Y5F7 938 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 A0A0B4J293 547 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 CCDC182A6NF36 153 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 GFRA2O00451 464 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 AKR7A2O43488 359 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 TMCC2O75069 709 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 MYCP01106 439 aaPredicted RBP18.05■□□□□ 0.48
SCARF1-202ENST00000348987 PRLP01236 227 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 EPOP01588 193 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 CSF2P04141 144 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 GATMP50440 423 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 ST3GAL4Q11206 333 aa18.05■□□□□ 0.48
SCARF1-202ENST00000348987 HYAL2Q12891 473 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms