RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 NFYCQ13952 458 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 RBBP5Q15291 538 aaKnown RBP20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 ZNF542PQ5EBM4 170 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 IYDQ6PHW0 289 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 MAMSTRQ6ZN01 415 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 TRIM48Q8IWZ4 208 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 MINDY1Q8N5J2 469 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 EFCAB3Q8N7B9 438 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 ZNF740Q8NDX6 193 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 CHTF18Q8WVB6 975 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 RHBGQ9H310 441 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 MAP3K13O43283 966 aa20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 LMNAP02545 664 aaKnown RBP20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 ACTR3P61158 418 aa20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 ZXDAP98168 799 aa20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 ZNF423Q2M1K9 1284 aa20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 TAF8Q7Z7C8 310 aa20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 DPP10Q8N608 796 aa20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 CLHC1Q8NHS4 586 aa20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 LRRC58Q96CX6 371 aa20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 C11orf24Q96F05 449 aaPredicted RBP20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 TSSK3Q96PN8 268 aa20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 GPATCH1Q9BRR8 931 aaKnown RBP20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 SIRT5Q9NXA8 310 aa20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 POMPQ9Y244 141 aa20.64■□□□□ 0.89
TSPAN3-202ENST00000346495 TRBV23OR9-2A0A075B6M9 112 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 ANKDD1BA6NHY2 528 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 H7BY64 318 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 TRIM38O00635 465 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 PRMT3O60678 531 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 WNT1P04628 370 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 XRCC1P18887 633 aaPredicted RBP20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 ME2P23368 584 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 PTX3P26022 381 aaPredicted RBP20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 CEACAM7Q14002 265 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 PAGE3Q5JUK9 113 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 SYT12Q8IV01 421 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 C1orf52Q8N6N3 182 aaKnown RBP20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 STMN2Q93045 179 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 CCDC124Q96CT7 223 aaKnown RBP20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 HSPA12BQ96MM6 686 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 PRAP1Q96NZ9 151 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 EBPLQ9BY08 206 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 IL1RL2Q9HB29 575 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 MRPS30Q9NP92 439 aaKnown RBP20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 POT1Q9NUX5 634 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 TMEM181Q9P2C4 612 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 APOBEC3BQ9UH17 382 aaKnown RBP20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 EML5Q05BV3 1969 aa20.63■□□□□ 0.89
TSPAN3-202ENST00000346495 KIR2DS5A0A0G2JLQ3 304 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 A0A0G2JNG1 304 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 KIR2DS3K7RE56 304 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 SORBS2O94875 1100 aaKnown RBP20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 TGFB1P01137 390 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 CHRM5P08912 532 aaPredicted RBP20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 JUNDP17535 347 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 PRPS1L1P21108 318 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 TACR1P25103 407 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 DGKQP52824 942 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 CSNK1G2P78368 415 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 KIR2DS5Q14953 304 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 FAM174BQ3ZCQ3 159 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 PRRT3Q5FWE3 981 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 SAMD4BQ5PRF9 694 aaKnown RBP20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 KRTCAP2Q8N6L1 136 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 OR4E2Q8NGC2 313 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 SLC13A3Q8WWT9 602 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 TESCQ96BS2 214 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 SRMSQ9H3Y6 488 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 TMEM184CQ9NVA4 438 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 MAPRE3Q9UPY8 281 aa20.62■□□□□ 0.89
TSPAN3-202ENST00000346495 FXYD1O00168 92 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 TLR4O00206 839 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 VIPP01282 170 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 HRH2P25021 359 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 MAOBP27338 520 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 CMPK1P30085 196 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 PEBP1P30086 187 aaKnown RBP20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 TIA1P31483 386 aaKnown RBP eCLIP20.61■□□□□ 0.898e-8■■■■□ 22.8
TSPAN3-202ENST00000346495 HNRNPH1P31943 449 aaKnown RBP20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 RAE1P78406 368 aaKnown RBP20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 SF1Q15637 639 aaKnown RBP20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 GALNT18Q6P9A2 607 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 SLC2A7Q6PXP3 512 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 PRR23BQ6ZRT6 265 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 VN1R5Q7Z5H4 357 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 OR2L3Q8NG85 312 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 JPH3Q8WXH2 748 aaPredicted RBP20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 SLC22A18Q96BI1 424 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 MIR1-1HGQ9H1L0 117 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 TM9SF3Q9HD45 589 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 SPHK1Q9NYA1 384 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 PACSIN3Q9UKS6 424 aa20.61■□□□□ 0.89
TSPAN3-202ENST00000346495 ISM1B1AKI9 464 aa20.6■□□□□ 0.89
TSPAN3-202ENST00000346495 SH3BGRLO75368 114 aa20.6■□□□□ 0.89
TSPAN3-202ENST00000346495 CSF2P04141 144 aa20.6■□□□□ 0.89
TSPAN3-202ENST00000346495 PGRP06401 933 aa20.6■□□□□ 0.89
TSPAN3-202ENST00000346495 CELA2BP08218 269 aaPredicted RBP20.6■□□□□ 0.89
TSPAN3-202ENST00000346495 BCKDHBP21953 392 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms