RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 DCUN1D3Q8IWE4 304 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 ZNF366Q8N895 744 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 CENPIQ92674 756 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 TFGQ92734 400 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 HMG20AQ9NP66 347 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 EMCNQ9ULC0 261 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 STRCP1A6NGW2 1772 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 A6NHS1 94 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 A8MUA0 341 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 SLC7A4O43246 635 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 TGM5O43548 720 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 FARS2O95363 451 aaKnown RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 THRBP10828 461 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 TYRP1P17643 537 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 CSNK2A2P19784 350 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 TCEA1P23193 301 aaKnown RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 CXCR1P25024 350 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 ARFIP1P53367 373 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 UFM1P61960 85 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 E2F1Q01094 437 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 HSF2Q03933 536 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 RIN1Q13671 783 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 NDUFAF6Q330K2 333 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 FBXL22Q6P050 247 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 DNM1P34Q6PK57 102 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 SLC2A7Q6PXP3 512 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 FAM92BQ6ZTR7 304 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 HDDC2Q7Z4H3 204 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 OR5T3Q8NGG3 340 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 TMEM40Q8WWA1 233 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 XAGE5Q8WWM1 108 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 IPCEF1Q8WWN9 437 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 RGMAQ96B86 450 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 LRRC58Q96CX6 371 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 PSKH2Q96QS6 385 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 SORT1Q99523 831 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 VRTNQ9H8Y1 702 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 PREBQ9HCU5 417 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 EPHA6Q9UF33 1036 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 KCNK6Q9Y257 313 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 A0A1B0GVG6 124 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 ECI2O75521 394 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 NADKO95544 446 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 FHP07954 510 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 SAGP10523 405 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 EDNRBP24530 442 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 HOXA11P31270 313 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 FOLR3P41439 243 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 AP1S2P56377 157 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 SLCO6A1Q86UG4 719 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 OR4E2Q8NGC2 313 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 ROPN1LQ96C74 230 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 POLR3BQ9NW08 1133 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 TRNAU1APQ9NX07 287 aaKnown RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 SDHDO14521 159 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 SEC24AO95486 1093 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 TTKP33981 857 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 GSTM4Q03013 218 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 CACTIN-AS1Q8N1I8 211 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 FRS2Q8WU20 508 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 PTPN18Q99952 460 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 KIFC1Q9BW19 673 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 EBPLQ9BY08 206 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 LRTM1Q9HBL6 345 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 PRORSD1PA6NEY8 169 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 hCG_2039718K7EN88 272 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 ZNF208O43345 1280 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 OR10H3O60404 316 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 AP2A2O94973 939 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 UROSP10746 265 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 HNRNPA2B1P22626 353 aaKnown RBP10.57□□□□□ -0.72
CLCN6-202ENST00000346436 PTPN5P54829 565 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 HMGCS1Q01581 520 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 MADCAM1Q13477 382 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 GTF2H2Q13888 395 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 FAM174BQ3ZCQ3 159 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 EGFLAMQ63HQ2 1017 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 GTF2H2CQ6P1K8 395 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 DEF8Q6ZN54 512 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 RBM12BQ8IXT5 1001 aaKnown RBP10.57□□□□□ -0.72
CLCN6-202ENST00000346436 RPLP0P6Q8NHW5 317 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 TIMMDC1Q9NPL8 285 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 GSTK1Q9Y2Q3 226 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 RBMX2Q9Y388 322 aaKnown RBP10.57□□□□□ -0.72
CLCN6-202ENST00000346436 ARSAP15289 507 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 ACADLP28330 430 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 OTX2P32243 289 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 KIR3DL1P43629 444 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 AGTR2P50052 363 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 DIO3P55073 304 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 MS4A2Q01362 244 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 MLF2Q15773 248 aaPredicted RBP10.57□□□□□ -0.72
CLCN6-202ENST00000346436 INAQ16352 499 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLCN6-202ENST00000346436 MVB12BQ9H7P6 319 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 UBE2ZQ9H832 354 aaPredicted RBP10.57□□□□□ -0.72
CLCN6-202ENST00000346436 CIB4A0PJX0 185 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 G3V2L1 256 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 AURKAO14965 403 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 PDPK1O15530 556 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms