RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PIM1P11309 404 aaPredicted RBP13.73□□□□□ -0.21
HMGN3-202ENST00000344726 ZNF37AP17032 561 aaPredicted RBP13.73□□□□□ -0.21
HMGN3-202ENST00000344726 SAT1P21673 171 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 EMP3P54852 163 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 RRADP55042 308 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 TAS2R39P59534 338 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 CSNK1G2P78368 415 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 CALCOCO2Q13137 446 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 PPP1R3AQ16821 1122 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 SLC6A19Q695T7 634 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 JMJD6Q6NYC1 403 aaPredicted RBP13.73□□□□□ -0.21
HMGN3-202ENST00000344726 SBSNQ6UWP8 590 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 ZDHHC24Q6UX98 284 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 VN1R4Q7Z5H5 301 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 CEP97Q8IW35 865 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 PALM2Q8IXS6 379 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 SHISA5Q8N114 240 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 GALNT16Q8N428 558 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 PYROXD1Q8WU10 500 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 COL26A1Q96A83 441 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 ALKBH8Q96BT7 664 aaKnown RBP13.73□□□□□ -0.21
HMGN3-202ENST00000344726 PYCR2Q96C36 320 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 PDLIM5Q96HC4 596 aaKnown RBP13.73□□□□□ -0.21
HMGN3-202ENST00000344726 IP6K3Q96PC2 410 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 ZNF552Q9H707 407 aaPredicted RBP13.73□□□□□ -0.21
HMGN3-202ENST00000344726 ZBTB20Q9HC78 741 aaPredicted RBP13.73□□□□□ -0.21
HMGN3-202ENST00000344726 TMEM184CQ9NVA4 438 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 ZNF451Q9Y4E5 1061 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 HS3ST3B1Q9Y662 390 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 DOPEY2Q9Y3R5 2298 aa13.73□□□□□ -0.21
HMGN3-202ENST00000344726 IGLV3-12A0A075B6K2 115 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 FEZF1A0PJY2 475 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 TTLL8A6PVC2 850 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 AGPSO00116 658 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 CDC7O00311 574 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 EIF3HO15372 352 aaKnown RBP eCLIP13.72□□□□□ -0.21
HMGN3-202ENST00000344726 NPPBP16860 134 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 MMP11P24347 488 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 PLTPP55058 493 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 GPX6P59796 221 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 KLC1Q07866 573 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 VWA2Q5GFL6 755 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 PRMT9Q6P2P2 845 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 KIRREL2Q6UWL6 708 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 LCTLQ6UWM7 567 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 AMER3Q8N944 861 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 OR56A3Q8NH54 315 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 FBXO25Q8TCJ0 367 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 STT3BQ8TCJ2 826 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 ANKRD49Q8WVL7 239 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 RERGQ96A58 199 aaPredicted RBP13.72□□□□□ -0.21
HMGN3-202ENST00000344726 VPS39Q96JC1 886 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 OR4K3Q96R72 315 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 MACROD1Q9BQ69 325 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 PCBD2Q9H0N5 130 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 RHOJQ9H4E5 214 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 ARL15Q9NXU5 204 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 UTP6Q9NYH9 597 aaKnown RBP13.72□□□□□ -0.21
HMGN3-202ENST00000344726 CDC23Q9UJX2 597 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 MAP4K5Q9Y4K4 846 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 PCDHGB7Q9Y5F8 929 aa13.72□□□□□ -0.21
HMGN3-202ENST00000344726 TCRBV9S1A1TA0A576 114 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 NPEPPSL1A6NEC2 478 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 PEX12O00623 359 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 LCMT2O60294 686 aaKnown RBP13.71□□□□□ -0.21
HMGN3-202ENST00000344726 WISP3O95389 354 aaPredicted RBP13.71□□□□□ -0.21
HMGN3-202ENST00000344726 GUCA1CO95843 209 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 HIST1H2AGP0C0S8 130 aaPredicted RBP13.71□□□□□ -0.21
HMGN3-202ENST00000344726 ZGLP1P0C6A0 271 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 CDH1P12830 882 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 HIST1H2ADP20671 130 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 FBLP22087 321 aaKnown RBP13.71□□□□□ -0.21
HMGN3-202ENST00000344726 BCL6P41182 706 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 AP1S2P56377 157 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 DSG2Q14126 1118 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 SYT16Q17RD7 645 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 VWA5B1Q5TIE3 1220 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 GARNL3Q5VVW2 1013 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 PRSS41Q7RTY9 318 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 LAPTM4BQ86VI4 370 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 C17orf64Q86WR6 236 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 PRSS58Q8IYP2 241 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 CPT1CQ8TCG5 803 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 FBXL8Q96CD0 374 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 HIST1H2AHQ96KK5 128 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 FER1L6-AS2Q96M78 137 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 C16orf45Q96MC5 204 aaPredicted RBP13.71□□□□□ -0.21
HMGN3-202ENST00000344726 HIST1H2AJQ99878 128 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 H2AFJQ9BTM1 129 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 CAB39LQ9H9S4 337 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 NSMCE4AQ9NXX6 385 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 ZNF282Q9UDV7 671 aaPredicted RBP13.71□□□□□ -0.21
HMGN3-202ENST00000344726 FBXL4Q9UKA2 621 aa13.71□□□□□ -0.21
HMGN3-202ENST00000344726 NXT1Q9UKK6 140 aaKnown RBP13.71□□□□□ -0.21
HMGN3-202ENST00000344726 MTO1Q9Y2Z2 717 aaKnown RBP13.71□□□□□ -0.21
HMGN3-202ENST00000344726 UTP11Q9Y3A2 253 aaKnown RBP13.71□□□□□ -0.21
HMGN3-202ENST00000344726 NBPF19A0A087WUL8 3843 aa13.71□□□□□ -0.22
HMGN3-202ENST00000344726 KCNE1BA0A087WTH5 132 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 A0A0A6YYC8 382 aaPredicted RBP13.7□□□□□ -0.22
HMGN3-202ENST00000344726 FAM159BA6NKW6 160 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms