RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SLC22A17Q8WUG5 538 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 CAMK1GQ96NX5 476 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 ATP13A1Q9HD20 1204 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 FKTNO75072 461 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 MYL3P08590 195 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 ZNF182P17025 639 aaPredicted RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 G0S2P27469 103 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 GKP32189 559 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 DPP6P42658 865 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 FSTL1Q12841 308 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 ZNF155Q12901 538 aaPredicted RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 LSAMPQ13449 338 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 TRMT11Q7Z4G4 463 aaKnown RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 SLC22A15Q8IZD6 547 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 FAM46DQ8NEK8 389 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 OR56B2PQ8NGI1 322 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 SMAP2Q8WU79 429 aaPredicted RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 TRAPPC12Q8WVT3 735 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 DCPSQ96C86 337 aaKnown RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 SGIP1Q9BQI5 828 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 MKS1Q9NXB0 559 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 MS4A12Q9NXJ0 267 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 ACSL6Q9UKU0 697 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 PTPRQQ9UMZ3 2332 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 VWDEQ8N2E2 1590 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 CEP170BQ9Y4F5 1589 aaPredicted RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 OBSL1O75147 1896 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 DCDC2BA2VCK2 349 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 CXCR6O00574 342 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 NUPL2O15504 423 aaKnown RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 DENRO43583 198 aaKnown RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 GABRA2P47869 451 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 PRKAG1P54619 331 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 RRAS2P62070 204 aaPredicted RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 RPL23AP62750 156 aaKnown RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 OGDHQ02218 1023 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 DPY19L1Q2PZI1 675 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 ATXN7L2Q5T6C5 722 aaPredicted RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 OR2T5Q6IEZ7 315 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 KCNT2Q6UVM3 1135 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 C1orf186Q6ZWK4 172 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 AQP12AQ8IXF9 295 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 TCTE3Q8IZS6 198 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 ANKRD52Q8NB46 1076 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 OR2T29Q8NH02 315 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 PMEPA1Q969W9 287 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 TMEM47Q9BQJ4 181 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 OR52A5Q9H2C5 316 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 TP63Q9H3D4 680 aaPredicted RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 FBXO44Q9H4M3 255 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 GPN2Q9H9Y4 310 aaPredicted RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 LRTM1Q9HBL6 345 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.02□□□□□ -1.453e-9■■■□□ 17.2
VCAN-203ENST00000343200 NEXMIFQ5QGS0 1516 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 DNAJB6O75190 326 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 MAOBP27338 520 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 NRIP1P48552 1158 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 SLC18A1P54219 525 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 ANTXR2P58335 489 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 CTBP1Q13363 440 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 TNK1Q13470 666 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 TSTQ16762 297 aaKnown RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 C4orf17Q53FE4 359 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 METTL2BQ6P1Q9 378 aaKnown RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 ZNF598Q86UK7 904 aaKnown RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 OR5H6Q8NGV6 325 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 RXFP2Q8WXD0 754 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 DNASE1L2Q92874 299 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 RSPRY1Q96DX4 576 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 METTL2AQ96IZ6 378 aaKnown RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 TECTBQ96PL2 329 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 QRSL1Q9H0R6 528 aaKnown RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 DZANK1Q9NVP4 752 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 KIDINS220Q9ULH0 1771 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 TOR1AO14656 332 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 LIASO43766 372 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 FABP1P07148 127 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 OR1E1P30953 314 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 RBMXP38159 391 aaKnown RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 MC1RQ01726 317 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 ZNF33AQ06730 810 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 RAB31Q13636 194 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 HIST2H3AQ71DI3 136 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 ZER1Q7Z7L7 766 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 OR2T35Q8NGX2 323 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 IRGQQ8WZA9 623 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 DYNLL2Q96FJ2 89 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 KCNC2Q96PR1 638 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 PINK1Q9BXM7 581 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 ZNF696Q9H7X3 374 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 MEAF6Q9HAF1 191 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 TMEM100Q9NV29 134 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 MRPL22Q9NWU5 206 aaKnown RBP6.02□□□□□ -1.45
VCAN-203ENST00000343200 ASB4Q9Y574 426 aa6.02□□□□□ -1.45
VCAN-203ENST00000343200 ZNF891A8MT65 544 aaPredicted RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 RAMP2O60895 175 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 UPP2O95045 317 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 JCHAINP01591 159 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 FOXM1Q08050 763 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 PPIGQ13427 754 aaKnown RBP eCLIP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms