RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 MAU2Q9Y6X3 613 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 NBEAQ8NFP9 2946 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 A8MT66 165 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 TARM1B6A8C7 271 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 RAD1O60671 282 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 PRAMEF4O60810 478 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 MED26O95402 600 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 COL6A2P12110 1019 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 PIK3CGP48736 1102 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 GPS2Q13227 327 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 SETDB1Q15047 1291 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 ST3GAL2Q16842 350 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 ZC3H12BQ5HYM0 836 aaKnown RBP12.63□□□□□ -0.39
TUBD1-202ENST00000340993 PRAMEF9Q5VWM5 478 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 NXPE4Q6UWF7 544 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 RNF44Q7L0R7 432 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 CACNA2D3Q8IZS8 1091 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 RNF175Q8N4F7 328 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 CSNK1A1LQ8N752 337 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 HNRNPLLQ8WVV9 542 aaKnown RBP12.63□□□□□ -0.39
TUBD1-202ENST00000340993 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.63□□□□□ -0.39
TUBD1-202ENST00000340993 MR1Q95460 341 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 CRELD1Q96HD1 420 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 IQCGQ9H095 443 aaKnown RBP12.63□□□□□ -0.39
TUBD1-202ENST00000340993 PPCSQ9HAB8 311 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 SEMA4BQ9NPR2 832 aaPredicted RBP12.63□□□□□ -0.39
TUBD1-202ENST00000340993 TMEM184CQ9NVA4 438 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 SLC17A7Q9P2U7 560 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 PILRAQ9UKJ1 303 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 PCDHGA7Q9Y5G6 932 aa12.63□□□□□ -0.39
TUBD1-202ENST00000340993 DLX3O60479 287 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 CPNE3O75131 537 aaKnown RBP12.62□□□□□ -0.39
TUBD1-202ENST00000340993 GLRA3O75311 464 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 B3GALT4O96024 378 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 CAPNS1P04632 268 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 EPORP19235 508 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 GRK3P35626 688 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 ALDH18A1P54886 795 aaKnown RBP12.62□□□□□ -0.39
TUBD1-202ENST00000340993 CDH13P55290 713 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 CLN3Q13286 438 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 CASP8Q14790 479 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 RBBP7Q16576 425 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.62□□□□□ -0.39
TUBD1-202ENST00000340993 C6orf15Q6UXA7 325 aaPredicted RBP12.62□□□□□ -0.39
TUBD1-202ENST00000340993 SH2D5Q6ZV89 423 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 GOLGA7Q7Z5G4 137 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 PROSER1Q86XN7 944 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 IQCKQ8N0W5 287 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 ARMC2Q8NEN0 867 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 ACMSDQ8TDX5 336 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 TEFMQ96QE5 360 aaKnown RBP12.62□□□□□ -0.39
TUBD1-202ENST00000340993 ROPN1BQ9BZX4 212 aaPredicted RBP12.62□□□□□ -0.39
TUBD1-202ENST00000340993 ROPN1Q9HAT0 212 aaPredicted RBP12.62□□□□□ -0.39
TUBD1-202ENST00000340993 TXLNGQ9NUQ3 528 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 LGALS13Q9UHV8 139 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 RUVBL1Q9Y265 456 aaKnown RBP12.62□□□□□ -0.39
TUBD1-202ENST00000340993 MRPS2Q9Y399 296 aaKnown RBP12.62□□□□□ -0.39
TUBD1-202ENST00000340993 PCDHGA3Q9Y5H0 932 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 PKD1L2Q7Z442 2459 aa12.62□□□□□ -0.39
TUBD1-202ENST00000340993 LOC101059948A0A1B0GTJ6 334 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 K7EPI3 171 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 NDUFS4O43181 175 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 IPO13O94829 963 aaKnown RBP12.61□□□□□ -0.39
TUBD1-202ENST00000340993 PCNAP12004 261 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 EZRP15311 586 aaKnown RBP12.61□□□□□ -0.39
TUBD1-202ENST00000340993 GNAZP19086 355 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 CCR10P46092 362 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 OR1D4P47884 311 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 RPS18P62269 152 aaKnown RBP12.61□□□□□ -0.39
TUBD1-202ENST00000340993 NFKB2Q00653 900 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 IRF8Q02556 426 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 CHIT1Q13231 466 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 DDX39BQ13838 428 aaKnown RBP12.61□□□□□ -0.39
TUBD1-202ENST00000340993 GTF2H2Q13888 395 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 GTF2H2CQ6P1K8 395 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 C19orf48Q6RUI8 117 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 LRRC70Q7Z2Q7 622 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 TMEM151BQ8IW70 566 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.61□□□□□ -0.39
TUBD1-202ENST00000340993 NLGN4XQ8N0W4 816 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 SHISA5Q8N114 240 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 RIBC1Q8N443 379 aaPredicted RBP12.61□□□□□ -0.39
TUBD1-202ENST00000340993 TMEM151AQ8N4L1 468 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 CCNYL1Q8N7R7 359 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 ZNF248Q8NDW4 579 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 NLGN4YQ8NFZ3 816 aaPredicted RBP12.61□□□□□ -0.39
TUBD1-202ENST00000340993 ATP6V1E2Q96A05 226 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 APOPT1Q96IL0 206 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 FAM111AQ96PZ2 611 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 TMEM237Q96Q45 408 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 OR2A5Q96R48 311 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 SMC6Q96SB8 1091 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 NDC1Q9BTX1 674 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 MECRQ9BV79 373 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 YIPF2Q9BWQ6 316 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 NOL11Q9H8H0 719 aaKnown RBP12.61□□□□□ -0.39
TUBD1-202ENST00000340993 MLXIPLQ9NP71 852 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 GEMIN8Q9NWZ8 242 aaKnown RBP12.61□□□□□ -0.39
TUBD1-202ENST00000340993 DCDC2Q9UHG0 476 aa12.61□□□□□ -0.39
TUBD1-202ENST00000340993 PTPRQQ9UMZ3 2332 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms