RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 TNFRSF11BO00300 401 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 PRAMEF4O60810 478 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 PRPS2P11908 318 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 PAX3P23760 479 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 SOAT1P35610 550 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 MRPL19P49406 292 aaKnown RBP13.93□□□□□ -0.18
CPSF7-201ENST00000340437 KCNJ8Q15842 424 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 TRIM71Q2Q1W2 868 aaKnown RBP13.93□□□□□ -0.18
CPSF7-201ENST00000340437 PRAMEF9Q5VWM5 478 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 C1orf52Q8N6N3 182 aaKnown RBP13.93□□□□□ -0.18
CPSF7-201ENST00000340437 DYNC2LI1Q8TCX1 351 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 C2orf49Q9BVC5 232 aaPredicted RBP13.93□□□□□ -0.18
CPSF7-201ENST00000340437 TMEM184CQ9NVA4 438 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 SPASTQ9UBP0 616 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 MAP4K5Q9Y4K4 846 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 ANKRD36A6QL64 1941 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 OXSR1O95747 527 aaPredicted RBP13.93□□□□□ -0.18
CPSF7-201ENST00000340437 CD70P32970 193 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 PREPP48147 710 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 ACOX1Q15067 660 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 UGT8Q16880 541 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 DGKKQ5KSL6 1271 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 CRTC1Q6UUV9 634 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 NAGSQ8N159 534 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 MFSD4AQ8N468 514 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 LILRA3Q8N6C8 439 aaPredicted RBP13.93□□□□□ -0.18
CPSF7-201ENST00000340437 DNAJC11Q9NVH1 559 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 DUSP12Q9UNI6 340 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 J3KTA2 159 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 OR56A5P0C7T3 313 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 MAPK1P28482 360 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 NSG1P42857 185 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 PRIM2P49643 509 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 RAB15P59190 212 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 KDM4DQ6B0I6 523 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 ZZZ3Q8IYH5 903 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 ENTHD1Q8IYW4 607 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 USP7Q93009 1102 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 PLD4Q96BZ4 506 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 CASD1Q96PB1 797 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 ZNF300Q96RE9 604 aaPredicted RBP13.93□□□□□ -0.18
CPSF7-201ENST00000340437 TCF25Q9BQ70 676 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 TSEN34Q9BSV6 310 aaKnown RBP13.93□□□□□ -0.18
CPSF7-201ENST00000340437 TPK1Q9H3S4 243 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 DUSP21Q9H596 190 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 MAGIXQ9H6Y5 334 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 RNF6Q9Y252 685 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 B3GNT3Q9Y2A9 372 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 PNMA8CA0A1B0GUJ8 204 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 A8MV72 311 aaPredicted RBP13.92□□□□□ -0.18
CPSF7-201ENST00000340437 TTC34A8MYJ7 566 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 ANXA4P09525 319 aaPredicted RBP13.92□□□□□ -0.18
CPSF7-201ENST00000340437 AMD1P17707 334 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 SERPINA4P29622 427 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 VEPH1Q14D04 833 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 DNAJB7Q7Z6W7 309 aaPredicted RBP13.92□□□□□ -0.18
CPSF7-201ENST00000340437 ZNF605Q86T29 641 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 CHPFQ8IZ52 775 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 OR8H2Q8N162 312 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 SLC5A8Q8N695 610 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 OR9Q2Q8NGE9 314 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 YIPF6Q96EC8 236 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 CEP19Q96LK0 163 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 CDK5RAP1Q96SZ6 601 aaKnown RBP13.92□□□□□ -0.18
CPSF7-201ENST00000340437 DUSP26Q9BV47 211 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 SLC6A14Q9UN76 642 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 PATJQ8NI35 1801 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 SPNP16150 400 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 HMGA1P17096 107 aaKnown RBP13.92□□□□□ -0.18
CPSF7-201ENST00000340437 AZGP1P25311 298 aaKnown RBP13.92□□□□□ -0.18
CPSF7-201ENST00000340437 FKBP1BP68106 108 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 MEF2AQ02078 507 aaPredicted RBP13.92□□□□□ -0.18
CPSF7-201ENST00000340437 ZNF404Q494X3 552 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 CCSMST1Q4G0I0 132 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 INO80DQ53TQ3 878 aaPredicted RBP13.92□□□□□ -0.18
CPSF7-201ENST00000340437 CALHM3Q86XJ0 350 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 ARMC8Q8IUR7 673 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 FAM217AQ8IXS0 508 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 HTATIP2Q9BUP3 242 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 ITPAQ9BY32 194 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 SGK2Q9HBY8 427 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 NECTIN3Q9NQS3 549 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 SCN10AQ9Y5Y9 1956 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 TRBV5-3A0A0A0MS03 114 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 E7EQ34 232 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 TMEM189-UBE2V1I3L0A0 370 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 TLL1O43897 1013 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 PCDH7O60245 1069 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 FZD6O60353 706 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 WBP4O75554 376 aaKnown RBP13.92□□□□□ -0.18
CPSF7-201ENST00000340437 ETFAP13804 333 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 SLC19A1P41440 591 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 GZMMP51124 257 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 CPTPQ5TA50 214 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 SZRD1Q7Z422 152 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 CMTM8Q8IZV2 173 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 OR4A15Q8NGL6 344 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 CD99L2Q8TCZ2 262 aa13.92□□□□□ -0.18
CPSF7-201ENST00000340437 DDX28Q9NUL7 540 aaKnown RBP13.92□□□□□ -0.18
CPSF7-201ENST00000340437 ADPRHL2Q9NX46 363 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms