RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 LRRC4CQ9HCJ2 640 aa13.92□□□□□ -0.18
ERCC1-203ENST00000340192 ZDHHC18Q9NUE0 388 aa13.92□□□□□ -0.18
ERCC1-203ENST00000340192 SPTA1P02549 2419 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 FEZF1A0PJY2 475 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 A6NL46 340 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 J3QKU1 62 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 PEX12O00623 359 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 TXNDC9O14530 226 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 CEACAM4O75871 244 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 WISP3O95389 354 aaPredicted RBP13.91□□□□□ -0.18
ERCC1-203ENST00000340192 STATHP02808 62 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 FBLP22087 321 aaKnown RBP13.91□□□□□ -0.18
ERCC1-203ENST00000340192 GP5P40197 560 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 RPS15AP62244 130 aaKnown RBP13.91□□□□□ -0.18
ERCC1-203ENST00000340192 CSNK1G2P78368 415 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 GARNL3Q5VVW2 1013 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 MMGT1Q8N4V1 131 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 FBF1Q8TES7 1133 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 TSPAN17Q96FV3 270 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 OR4K3Q96R72 315 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 GPR22Q99680 433 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 HAUS8Q9BT25 410 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 P4HTMQ9NXG6 502 aa13.91□□□□□ -0.18
ERCC1-203ENST00000340192 ZNF282Q9UDV7 671 aaPredicted RBP13.91□□□□□ -0.18
ERCC1-203ENST00000340192 NXT1Q9UKK6 140 aaKnown RBP13.91□□□□□ -0.18
ERCC1-203ENST00000340192 PCDHGA9Q9Y5G4 932 aaKnown RBP13.91□□□□□ -0.18
ERCC1-203ENST00000340192 KCNE1BA0A087WTH5 132 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 VSTM2BA6NLU5 285 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 PYCARD-AS1I3L0S3 204 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 FAM155BO75949 473 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 TUBB4AP04350 444 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 MMP11P24347 488 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 STX2P32856 288 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 BCL6P41182 706 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 PGDP52209 483 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 OCA2Q04671 838 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 DSG2Q14126 1118 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 USP10Q14694 798 aaKnown RBP13.9□□□□□ -0.18
ERCC1-203ENST00000340192 TSNQ15631 228 aaKnown RBP13.9□□□□□ -0.18
ERCC1-203ENST00000340192 COLEC12Q5KU26 742 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 FRA10AC1Q70Z53 315 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 VN1R4Q7Z5H5 301 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 ADAMTSL2Q86TH1 951 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 SPATA6LQ8N4H0 392 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 PPM1NQ8N819 430 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 AMER3Q8N944 861 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 CLEC1AQ8NC01 280 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 NOA1Q8NC60 698 aaKnown RBP13.9□□□□□ -0.18
ERCC1-203ENST00000340192 MNS1Q8NEH6 495 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 FDCSPQ8NFU4 85 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 MVB12AQ96EY5 273 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 MMABQ96EY8 250 aaPredicted RBP13.9□□□□□ -0.18
ERCC1-203ENST00000340192 FER1L6-AS2Q96M78 137 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 MACROD1Q9BQ69 325 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 TRIM4Q9C037 500 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 UNKQ9C0B0 810 aaKnown RBP13.9□□□□□ -0.18
ERCC1-203ENST00000340192 DRC3Q9H069 523 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 MLXIPLQ9NP71 852 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 CTNNAL1Q9UBT7 734 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 ANAPC2Q9UJX6 822 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 CDC14AQ9UNH5 594 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 OARD1Q9Y530 152 aa13.9□□□□□ -0.18
ERCC1-203ENST00000340192 A0A0A6YYC8 382 aaPredicted RBP13.89□□□□□ -0.19
ERCC1-203ENST00000340192 I3L1I5 382 aaPredicted RBP13.89□□□□□ -0.19
ERCC1-203ENST00000340192 AGPSO00116 658 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 KIF2AO00139 706 aaPredicted RBP13.89□□□□□ -0.19
ERCC1-203ENST00000340192 MASP2O00187 686 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 SOCS6O14544 535 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 PHGDHO43175 533 aaKnown RBP13.89□□□□□ -0.19
ERCC1-203ENST00000340192 FOXS1O43638 330 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 LCMT2O60294 686 aaKnown RBP13.89□□□□□ -0.19
ERCC1-203ENST00000340192 IGHEP01854 428 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 ANXA5P08758 320 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 ZGLP1P0C6A0 271 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 CCDC166P0CW27 439 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 STMN1P16949 149 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 SPRP35270 261 aaPredicted RBP13.89□□□□□ -0.19
ERCC1-203ENST00000340192 GRK3P35626 688 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 SLC26A3P40879 764 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 CASRP41180 1078 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 CCR8P51685 355 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 SNRPNP63162 240 aaKnown RBP13.89□□□□□ -0.19
ERCC1-203ENST00000340192 CDKL1Q00532 357 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 MEF2AQ02078 507 aaPredicted RBP13.89□□□□□ -0.19
ERCC1-203ENST00000340192 KLC1Q07866 573 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 KLRB1Q12918 225 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 RAPSNQ13702 412 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 EFTUD2Q15029 972 aaKnown RBP eCLIP13.89□□□□□ -0.193e-7■■■■■ 48.8
ERCC1-203ENST00000340192 DCAF10Q5QP82 559 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 GRTP1Q5TC63 336 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 PRSS58Q8IYP2 241 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 ABHD11Q8NFV4 315 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 STT3BQ8TCJ2 826 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 NACC2Q96BF6 587 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 MIEF2Q96C03 454 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 TM4SF19Q96DZ7 209 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 THAP11Q96EK4 314 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 TSNARE1Q96NA8 513 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 EGFL8Q99944 293 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 NUDT9Q9BW91 350 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms