RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 TESCQ96BS2 214 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 HAUS8Q9BT25 410 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 ACTR3BQ9P1U1 418 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 PCDHB14Q9Y5E9 798 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 GNG14A0A1W2PPG7 69 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 H7BY64 318 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 AXIN1O15169 862 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 MYO1DO94832 1006 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 EFNA1P20827 205 aaPredicted RBP21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 PRPS1L1P21108 318 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 ATP6V1C1P21283 382 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 SFT2D3Q587I9 215 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 ARMCX6Q7L4S7 300 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 GPR180Q86V85 440 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 FAM129CQ86XR2 697 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 FAM20CQ8IXL6 584 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 FAM9CQ8IZT9 166 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 ASB12Q8WXK4 309 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 PRAP1Q96NZ9 151 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 OR2M4Q96R27 311 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 ECSITQ9BQ95 431 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 KLHL4Q9C0H6 718 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 REXO4Q9GZR2 422 aaKnown RBP21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 SEMA6AQ9H2E6 1030 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 C6orf106Q9H6K1 298 aaPredicted RBP21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 TBC1D29Q9UFV1 150 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 CYP8B1Q9UNU6 501 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 BTBD3Q9Y2F9 522 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 FEZF1A0PJY2 475 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 SEMA4FO95754 770 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 ACPPP15309 386 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 CYP4F2P78329 520 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 SFSWAPQ12872 951 aaKnown RBP21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 NFATC4Q14934 902 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 UAP1L1Q3KQV9 507 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 TLDC1Q6P9B6 456 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 VN1R5Q7Z5H4 357 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 PHACTR4Q8IZ21 702 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 LRTOMTQ8WZ04 291 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 SMPDL3AQ92484 453 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 ZUFSPQ96AP4 578 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 SCARF2Q96GP6 870 aaPredicted RBP21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 PAIP1Q9H074 479 aaKnown RBP21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 AURKCQ9UQB9 309 aa21.57■■□□□ 1.04
PDLIM2-203ENST00000339162 CASQ2O14958 399 aaPredicted RBP21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 COX7A2P14406 83 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 KIR3DL1P43629 444 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 LCN8Q6JVE9 175 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 GCNT7Q6ZNI0 430 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 OR10A6Q8NH74 314 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 WDR48Q8TAF3 677 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 MIEF2Q96C03 454 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 SNX13Q9Y5W8 968 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 EIF4E1BA6NMX2 242 aaKnown RBP21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 FOXE1O00358 373 aaPredicted RBP21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 PCDH7O60245 1069 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 C1QCP02747 245 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 C7P10643 843 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 OXTRP30559 389 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 KIAA1024LP59773 190 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 SMAD2Q15796 467 aaKnown RBP21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 SPIN4Q56A73 249 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 COMMD6Q7Z4G1 85 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 PTRH1Q86Y79 214 aaKnown RBP21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 OR8J3Q8NGG0 315 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 OR52E1Q8NGJ3 308 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 WDR92Q96MX6 357 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 MCM8Q9UJA3 840 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 USP34Q70CQ2 3546 aa21.56■■□□□ 1.04
PDLIM2-203ENST00000339162 TRBV23OR9-2A0A075B6M9 112 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 CHRNB1P11230 501 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 LAMP1P11279 417 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 ACADSP16219 412 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 HRH2P25021 359 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 SLC7A1P30825 629 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 HSD17B2P37059 387 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 AQP4P55087 323 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 CTBSQ01459 385 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 CYP4F3Q08477 520 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 LAPTM5Q13571 262 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 RPE65Q16518 533 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 SLC30A9Q6PML9 568 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 PRR23BQ6ZRT6 265 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 PLD3Q8IV08 490 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 ZNF583Q96ND8 569 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 HHIPQ96QV1 700 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 TBCDQ9BTW9 1192 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 SORBS1Q9BX66 1292 aaKnown RBP21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 TMEM168Q9H0V1 697 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 KCNH6Q9H252 994 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 SLC2A4RGQ9NR83 387 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 SPATA7Q9P0W8 599 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 V9GYQ6 96 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 YY2O15391 372 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 TIPRLO75663 272 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 TIA1P31483 386 aaKnown RBP eCLIP21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 RAB28P51157 221 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 SPATS1Q496A3 300 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 RUNDC3AQ59EK9 446 aa21.55■■□□□ 1.04
PDLIM2-203ENST00000339162 OGFRL1Q5TC84 451 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms