RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 GPR149Q86SP6 731 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 METTL3Q86U44 580 aaKnown RBP18.2■□□□□ 0.5
PSPC1-201ENST00000338910 RBFAQ8N0V3 343 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 ZNF540Q8NDQ6 660 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 LKAAEAR1Q8TD35 194 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 GTF2H4Q92759 462 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 PROX1Q92786 737 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 PYCR2Q96C36 320 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 ZNF382Q96SR6 550 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 ZDHHC6Q9H6R6 413 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 ZBTB20Q9HC78 741 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-201ENST00000338910 VNN3Q9NY84 501 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 CRLS1Q9UJA2 301 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 E2F3O00716 465 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 MRPS14O60783 128 aaKnown RBP18.2■□□□□ 0.5
PSPC1-201ENST00000338910 UGT2B10P36537 528 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 HTR6P50406 440 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 ERVPABLB-1P60509 514 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 SMN1Q16637 294 aaKnown RBP18.2■□□□□ 0.5
PSPC1-201ENST00000338910 FAM109BQ6ICB4 259 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-201ENST00000338910 C22orf39Q6P5X5 142 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 GRASPQ7Z6J2 395 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-201ENST00000338910 MSRB3Q8IXL7 192 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 RAVER1Q8IY67 606 aaKnown RBP18.2■□□□□ 0.5
PSPC1-201ENST00000338910 GPR26Q8NDV2 337 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 OR52B6Q8NGF0 335 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 SLC13A3Q8WWT9 602 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 ASIC4Q96FT7 647 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 CDK15Q96Q40 435 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 TBCDQ9BTW9 1192 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 MCOLN1Q9GZU1 580 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 SUV39H2Q9H5I1 410 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 CCNB1IP1Q9NPC3 277 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 ERVW-1Q9UQF0 538 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 EIF3LQ9Y262 564 aaKnown RBP18.2■□□□□ 0.5
PSPC1-201ENST00000338910 HS3ST2Q9Y278 367 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 FAM172BPA6NC97 362 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 LCKP06239 509 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 CYP4B1P13584 511 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 TRAF3Q13114 568 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 CPZQ66K79 652 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 LRRC66Q68CR7 880 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 LETMD1Q6P1Q0 360 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 SHQ1Q6PI26 577 aaKnown RBP18.19■□□□□ 0.5
PSPC1-201ENST00000338910 CCBE1Q6UXH8 406 aaPredicted RBP18.19■□□□□ 0.5
PSPC1-201ENST00000338910 ZSWIM3Q96MP5 696 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 SIGLEC11Q96RL6 698 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 RIBC2Q9H4K1 309 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 SLC25A37Q9NYZ2 338 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.19■□□□□ 0.5
PSPC1-201ENST00000338910 POLR3HQ9Y535 204 aaPredicted RBP18.19■□□□□ 0.5
PSPC1-201ENST00000338910 HELZP42694 1942 aaKnown RBP18.19■□□□□ 0.5
PSPC1-201ENST00000338910 CREG1O75629 220 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 ACRV1P26436 265 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 ARL1P40616 181 aaPredicted RBP18.19■□□□□ 0.5
PSPC1-201ENST00000338910 TRPC1P48995 793 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 UBE3AQ05086 875 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 ARHGAP15Q53QZ3 475 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 RSBN1Q5VWQ0 802 aaPredicted RBP18.19■□□□□ 0.5
PSPC1-201ENST00000338910 PNCKQ6P2M8 343 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 RFLNAQ6ZTI6 216 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 HEATR4Q86WZ0 1026 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 MICU2Q8IYU8 434 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 METTL4Q8N3J2 472 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 ING5Q8WYH8 240 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 SCRN2Q96FV2 425 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 PDLIM5Q96HC4 596 aaKnown RBP18.19■□□□□ 0.5
PSPC1-201ENST00000338910 HBEGFQ99075 208 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 BARD1Q99728 777 aaKnown RBP18.19■□□□□ 0.5
PSPC1-201ENST00000338910 OR2B2Q9GZK3 357 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 GABARAPL1Q9H0R8 117 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 MIR1-1HGQ9H1L0 117 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 RWDD3Q9Y3V2 267 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 A3GALT2U3KPV4 340 aa18.19■□□□□ 0.5
PSPC1-201ENST00000338910 CENPBD1B2RD01 187 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 C5orf67F2Z3F1 127 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 CCNKO75909 580 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 IL1RNP18510 177 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 MAGP20916 626 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 CXCR2P25025 360 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 GTF2E2P29084 291 aaKnown RBP18.18■□□□□ 0.5
PSPC1-201ENST00000338910 SPAM1P38567 509 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 RFTN2Q52LD8 501 aaPredicted RBP18.18■□□□□ 0.5
PSPC1-201ENST00000338910 Q6ZVU0 165 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 IL17RDQ8NFM7 739 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 IRF7Q92985 503 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 SLC38A4Q969I6 547 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 SLC25A13Q9UJS0 675 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 IDH3BO43837 385 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 GUCA1CO95843 209 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 TYRP14679 529 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 DDX6P26196 483 aaKnown RBP eCLIP18.18■□□□□ 0.5
PSPC1-201ENST00000338910 CLK1P49759 484 aaKnown RBP18.18■□□□□ 0.5
PSPC1-201ENST00000338910 PTSQ03393 145 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 NR6A1Q15406 480 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 UBE2UQ5VVX9 321 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 IL27RAQ6UWB1 636 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 GDPD3Q7L5L3 318 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 CCDC103Q8IW40 242 aa18.18■□□□□ 0.5
PSPC1-201ENST00000338910 CHST14Q8NCH0 376 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms