RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CUL1Q13616 776 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 PTK6Q13882 451 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 FAM53BQ14153 422 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 KCTD19Q17RG1 926 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-202ENST00000337571 MFSD4BQ5TF39 518 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 ANKRD22Q5VYY1 191 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 FAAH2Q6GMR7 532 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 ZNF425Q6IV72 752 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 LRRC8EQ6NSJ5 796 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 RPUSD3Q6P087 351 aaKnown RBP10.13□□□□□ -0.79
CAPN3-202ENST00000337571 UBE2R2Q712K3 238 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-202ENST00000337571 DENND6AQ8IWF6 608 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 BCORP1Q8N888 145 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 FBXO15Q8NCQ5 510 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-202ENST00000337571 CATSPER1Q8NEC5 780 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 GRK7Q8WTQ7 553 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 PRAP1Q96NZ9 151 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 SERPINB12Q96P63 405 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 OR2A5Q96R48 311 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 GPR21Q99679 349 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 TGIF2Q9GZN2 237 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.13□□□□□ -0.79
CAPN3-202ENST00000337571 PCBD2Q9H0N5 130 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 TMEM184CQ9NVA4 438 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 RIC8BQ9NVN3 520 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 MKL2Q9ULH7 1088 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 OSGIN2Q9Y236 505 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 PPP2R2CQ9Y2T4 447 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 MRPS2Q9Y399 296 aaKnown RBP10.13□□□□□ -0.79
CAPN3-202ENST00000337571 IGHV1-45A0A0A0MS14 117 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 IGKV1-8A0A0C4DH67 115 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 GOLGA6L10A0A0M3HER8 536 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 FFAR3O14843 346 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 GPR42O15529 346 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 KIF5CO60282 957 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 HAUS5O94927 633 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 BMP10O95393 424 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 HIST1H2AGP0C0S8 130 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-202ENST00000337571 PRR35P0CG20 571 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 RNF224P0DH78 156 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 COX6A1P12074 109 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 HIST1H2ADP20671 130 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 GRK3P35626 688 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 SLC1A2P43004 574 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 RGS4P49798 205 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 RPS15AP62244 130 aaKnown RBP10.12□□□□□ -0.79
CAPN3-202ENST00000337571 PPP1R7Q15435 360 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 HSP90AA5PQ58FG0 334 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 TTC27Q6P3X3 843 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 RIPOR1Q6ZS17 1223 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 RASGEF1CQ8N431 466 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 SIRT6Q8N6T7 355 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.12□□□□□ -0.79
CAPN3-202ENST00000337571 BRIX1Q8TDN6 353 aaKnown RBP10.12□□□□□ -0.79
CAPN3-202ENST00000337571 HAS2Q92819 552 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 MS4A14Q96JA4 679 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 HIST1H2AHQ96KK5 128 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 CCDC138Q96M89 665 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 SLC30A3Q99726 388 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 HIST1H2AJQ99878 128 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 TRIM56Q9BRZ2 755 aaKnown RBP10.12□□□□□ -0.79
CAPN3-202ENST00000337571 FAM167BQ9BTA0 163 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 H2AFJQ9BTM1 129 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 CCDC177Q9NQR7 707 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-202ENST00000337571 OLAHQ9NV23 265 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 STMN3Q9NZ72 180 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 TEKT2Q9UIF3 430 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 TRMT6Q9UJA5 497 aaKnown RBP10.12□□□□□ -0.79
CAPN3-202ENST00000337571 FBXO5Q9UKT4 447 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 ICE1Q9Y2F5 2266 aa10.12□□□□□ -0.79
CAPN3-202ENST00000337571 KCNE1BA0A087WTH5 132 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 TRAV17A0A0B4J275 112 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 ZCWPW2A0A1B0GU75 182 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 A0A1B0GUH1 482 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 H0YIG0 161 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 PGRMC1O00264 195 aaKnown RBP10.11□□□□□ -0.79
CAPN3-202ENST00000337571 EIF3FO00303 357 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-202ENST00000337571 HAT1O14929 419 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 CLDN1O95832 211 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 C8GP07360 202 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 C8orf89P0DMQ9 161 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 CCND1P24385 295 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 COL8A1P27658 744 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 TNFSF10P50591 281 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 MINDY4Q4G0A6 757 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 ABHD17BQ5VST6 288 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 ZNF549Q6P9A3 640 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 CYHR1Q6ZMK1 362 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 PCGF5Q86SE9 256 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 PLD3Q8IV08 490 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 PPIL6Q8IXY8 311 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 CPNE9Q8IYJ1 553 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 MYO1HQ8N1T3 1032 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 CAMKVQ8NCB2 501 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 ALKBH8Q96BT7 664 aaKnown RBP10.11□□□□□ -0.79
CAPN3-202ENST00000337571 TUBB6Q9BUF5 446 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 TRIM54Q9BYV2 358 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 FAM129AQ9BZQ8 928 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 ZNF700Q9H0M5 742 aa10.11□□□□□ -0.79
CAPN3-202ENST00000337571 IARS2Q9NSE4 1012 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms