RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 MTMR11A4FU01 709 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 TLX2O43763 284 aaPredicted RBP13.36□□□□□ -0.27
RTN4-202ENST00000337526 GMFGO60234 142 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 POP7O75817 140 aaKnown RBP13.36□□□□□ -0.27
RTN4-202ENST00000337526 JUNP05412 331 aaKnown RBP13.36□□□□□ -0.27
RTN4-202ENST00000337526 ACP5P13686 325 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 TAS2R50P59544 299 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 RPS3AP61247 264 aaKnown RBP13.36□□□□□ -0.27
RTN4-202ENST00000337526 GRB14Q14449 540 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 ZNF630Q2M218 657 aaPredicted RBP13.36□□□□□ -0.27
RTN4-202ENST00000337526 GPRC6AQ5T6X5 926 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 FAAH2Q6GMR7 532 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 PGBD2Q6P3X8 592 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 TMIGD1Q6UXZ0 262 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 TAF8Q7Z7C8 310 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 TICAM1Q8IUC6 712 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 CCDC36Q8IYA8 594 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 KLHL36Q8N4N3 616 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 AUTS2Q8WXX7 1259 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 TEPSINQ96N21 525 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 TCF7L1Q9HCS4 588 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 MKLN1Q9UL63 735 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 GON4LQ3T8J9 2241 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 ZNF879B4DU55 563 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 MID1O15344 667 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 KRT33AO76009 404 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 CHRM1P11229 460 aaPredicted RBP13.36□□□□□ -0.27
RTN4-202ENST00000337526 CD72P21854 359 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 DDX6P26196 483 aaKnown RBP eCLIP13.36□□□□□ -0.274e-30■□□□□ 10.7
RTN4-202ENST00000337526 LRRC32Q14392 662 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 RAB39AQ14964 217 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 WSCD2Q2TBF2 565 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 EIPR1Q53HC9 387 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 CYBRD1Q53TN4 286 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 TP53INP2Q8IXH6 220 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 CENPSQ8N2Z9 138 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 NUS1Q96E22 293 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 HAPLN2Q9GZV7 340 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 MEAF6Q9HAF1 191 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 MYH15Q9Y2K3 1946 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 A0A1W2PRG6 482 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 ERI3O43414 337 aaKnown RBP13.35□□□□□ -0.27
RTN4-202ENST00000337526 CA12O43570 354 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 ITGB1P05556 798 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 RB1P06400 928 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 PROZP22891 400 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 ETV4P43268 484 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 ERVK-21P61565 698 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 DNASE1L3Q13609 305 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 MARCH9Q86YJ5 346 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 KCT2Q8NC54 265 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 EFHD2Q96C19 240 aaPredicted RBP13.35□□□□□ -0.27
RTN4-202ENST00000337526 HCN4Q9Y3Q4 1203 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 CD2P06729 351 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 HTR1EP28566 365 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 MAGEA11P43364 429 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 SMSP52788 366 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 PUDPQ08623 228 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 CBLBQ13191 982 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 ASB18Q6ZVZ8 466 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 MINDY1Q8N5J2 469 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 SLAIN1Q8ND83 568 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 OR8J3Q8NGG0 315 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 KBTBD7Q8WVZ9 684 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 TFGQ92734 400 aaPredicted RBP13.35□□□□□ -0.27
RTN4-202ENST00000337526 TRIM2Q9C040 744 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 B3GALT2O43825 422 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 MAFKO60675 156 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 ACSL1P33121 698 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 TMBIM6P55061 237 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 TXNL4AP83876 142 aaKnown RBP13.35□□□□□ -0.27
RTN4-202ENST00000337526 OGFRL1Q5TC84 451 aaPredicted RBP13.35□□□□□ -0.27
RTN4-202ENST00000337526 OR4K1Q8NGD4 311 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 ZNF461Q8TAF7 563 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 HERVK_113Q902F9 699 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 ZSWIM3Q96MP5 696 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 SYT11Q9BT88 431 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 RAB11FIP5Q9BXF6 653 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 MARCH4Q9P2E8 410 aaPredicted RBP13.35□□□□□ -0.27
RTN4-202ENST00000337526 TAC3Q9UHF0 121 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 PTGDR2Q9Y5Y4 395 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 ANXA2P2A6NMY6 339 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 GNB5O14775 395 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 SOX14O95416 240 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 OAS1P00973 400 aaKnown RBP13.35□□□□□ -0.27
RTN4-202ENST00000337526 ANXA2P07355 339 aaKnown RBP13.35□□□□□ -0.27
RTN4-202ENST00000337526 RPS13P62277 151 aaKnown RBP13.35□□□□□ -0.27
RTN4-202ENST00000337526 SMCO1Q147U7 214 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 ATAT1Q5SQI0 421 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 KLHL24Q6TFL4 600 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 SYVN1Q86TM6 617 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 WFIKKN2Q8TEU8 576 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 RTP4Q96DX8 246 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 ST14Q9Y5Y6 855 aa13.35□□□□□ -0.27
RTN4-202ENST00000337526 DENRO43583 198 aaKnown RBP13.34□□□□□ -0.27
RTN4-202ENST00000337526 INHAP05111 366 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 ZNF30P17039 623 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 BDKRB1P46663 353 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 CLCNKAP51800 687 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 SLC13A2Q13183 592 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms