RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SCIMPQ6UWF3 145 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 TMPRSS9Q7Z410 1059 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 ADCK2Q7Z695 626 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 PLD3Q8IV08 490 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 LAS2Q8IYD9 372 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 KIRREL3Q8IZU9 778 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 OR7G3Q8NG95 312 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 NETO1Q8TDF5 533 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 USP7Q93009 1102 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 FAR2Q96K12 515 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 HBEGFQ99075 208 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 ELAC2Q9BQ52 826 aaKnown RBP20.64■□□□□ 0.9
TPM1-204ENST00000334895 NUDT22Q9BRQ3 303 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 TRIM55Q9BYV6 548 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 NUF2Q9BZD4 464 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 NSRP1Q9H0G5 558 aaKnown RBP20.64■□□□□ 0.9
TPM1-204ENST00000334895 PSD3Q9NYI0 1048 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 DCTN4Q9UJW0 460 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 SNX7Q9UNH6 387 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 MN1Q10571 1320 aaPredicted RBP20.64■□□□□ 0.89
TPM1-204ENST00000334895 PIP5K1BO14986 540 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 FAM107AO95990 144 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 C9P02748 559 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 RPLP0P05388 317 aaKnown RBP20.64■□□□□ 0.89
TPM1-204ENST00000334895 ST6GAL1P15907 406 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 ACP1P24666 158 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 HRH2P25021 359 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 HK2P52789 917 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 AQP5P55064 265 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 LAPTM5Q13571 262 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 PAGE2BQ5JRK9 111 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 FRG2Q64ET8 278 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 MED27Q6P2C8 311 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 FIGLAQ6QHK4 219 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 RNF175Q8N4F7 328 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 ANKRD53Q8N9V6 530 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 PPP1R36Q96LQ0 422 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 FRG2BQ96QU4 278 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 AIF1LQ9BQI0 150 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 SEMA6CQ9H3T2 930 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 VTI1BQ9UEU0 232 aa20.64■□□□□ 0.89
TPM1-204ENST00000334895 ATXN7L1Q9ULK2 861 aaPredicted RBP20.64■□□□□ 0.89
TPM1-204ENST00000334895 PCNX2A6NKB5 2137 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 SLCO1B7G3V0H7 640 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 HGSO14964 777 aaPredicted RBP20.63■□□□□ 0.89
TPM1-204ENST00000334895 LCMT2O60294 686 aaKnown RBP20.63■□□□□ 0.89
TPM1-204ENST00000334895 PDYNP01213 254 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 TROVE2P10155 538 aaKnown RBP eCLIP20.63■□□□□ 0.89
TPM1-204ENST00000334895 LIMK1P53667 647 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 SGO1Q5FBB7 561 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 WDR74Q6RFH5 385 aaPredicted RBP20.63■□□□□ 0.89
TPM1-204ENST00000334895 TMIGD1Q6UXZ0 262 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 VN1R5Q7Z5H4 357 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 PIGWQ7Z7B1 504 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 CHCHD4Q8N4Q1 142 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 AFAP1L2Q8N4X5 818 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 MTFMTQ96DP5 389 aaKnown RBP20.63■□□□□ 0.89
TPM1-204ENST00000334895 ZDHHC12Q96GR4 267 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 C3orf30Q96M34 536 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 TRAPPC9Q96Q05 1148 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 EBF4Q9BQW3 602 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 LRRN3Q9H3W5 708 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 KLHL14Q9P2G3 628 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 SNX6Q9UNH7 406 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 PCDHGA11Q9Y5H2 935 aa20.63■□□□□ 0.89
TPM1-204ENST00000334895 MDC1Q14676 2089 aaKnown RBP20.62■□□□□ 0.89
TPM1-204ENST00000334895 TLCD2A6NGC4 264 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 ZW10O43264 779 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 SNX3O60493 162 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 CTSVO60911 334 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 KRT6AP02538 564 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 KRT6BP04259 564 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 CDH3P22223 829 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 BCL6P41182 706 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 KRT6CP48668 564 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 INHBCP55103 352 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 SLC9B1Q4ZJI4 515 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 EPGNQ6UW88 154 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 RNF165Q6ZSG1 346 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 SPATA21Q7Z572 469 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 PLXDC1Q8IUK5 500 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.62■□□□□ 0.89
TPM1-204ENST00000334895 KRT78Q8N1N4 520 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 ZUFSPQ96AP4 578 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 C19orf60Q96EN9 201 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 CD180Q99467 661 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 SARGQ9BW04 601 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 ELOVL6Q9H5J4 265 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 NT5DC2Q9H857 520 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 MEAF6Q9HAF1 191 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 C1GALT1Q9NS00 363 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 ANKMY1Q9P2S6 941 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 KLHL3Q9UH77 587 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 PILRAQ9UKJ1 303 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 SPEGQ15772 3267 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 DCHS1Q96JQ0 3298 aa20.62■□□□□ 0.89
TPM1-204ENST00000334895 IGHV5-51A0A0C4DH38 117 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 A0A0G2JND7 137 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 TRBC2A0A5B9 178 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 SLC9B1P1A6NJY1 282 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms