RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 ARHGAP44Q17R89 818 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 INSCQ1MX18 579 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 INF2Q27J81 1249 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF791Q3KP31 576 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ZCWPW2Q504Y3 356 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PPP6R3Q5H9R7 873 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 KLHDC7AQ5VTJ3 777 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 LGALS9CQ6DKI2 356 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PPP4R4Q6NUP7 873 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CPLX2Q6PUV4 134 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 LCTLQ6UWM7 567 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 GPRIN3Q6ZVF9 776 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 NLRP9Q7RTR0 991 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 GLCCI1Q86VQ1 547 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 EGFL6Q8IUX8 553 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ULK2Q8IYT8 1036 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 GPR135Q8IZ08 494 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CADM3Q8N126 398 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 STK40Q8N2I9 435 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 Q8N7P7 452 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 OR11G2Q8NGC1 345 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 OR51F2Q8NH61 342 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 DNAJC19Q96DA6 116 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 NUS1Q96E22 293 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MRFAP1L1Q96HT8 127 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CPB2Q96IY4 423 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CCDC138Q96M89 665 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 SLC39A3Q9BRY0 314 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 LINC00470Q9BZP3 86 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 NUCKS1Q9H1E3 243 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MS4A5Q9H3V2 200 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 EHD1Q9H4M9 534 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 GSX1Q9H4S2 264 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ATP13A3Q9H7F0 1226 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ACTR8Q9H981 624 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 POPDC2Q9HBU9 364 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ANO2Q9NQ90 1003 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 OCIAD1Q9NX40 245 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PLEK2Q9NYT0 353 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 GRHL1Q9NZI5 618 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 STOX2Q9P2F5 926 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 NDRG3Q9UGV2 375 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ATPIF1Q9UII2 106 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PACSIN3Q9UKS6 424 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 VANGL2Q9ULK5 521 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 SIGLEC7Q9Y286 467 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CA5BQ9Y2D0 317 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 HRH3Q9Y5N1 445 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 IGF2RP11717 2491 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 LOC100653049A0A140TA62 436 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 A0A1B0GTH6 734 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 TCRBV16S1A1N1A0A5B0 115 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CLPSL1A2RUU4 121 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 TRIM49BA6NDI0 452 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 WASHC1A8K0Z3 465 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 K7EP13 123 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF749O43361 778 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 TBX19O60806 448 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 HIP1RO75146 1068 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 RTN2O75298 545 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ERN1O75460 977 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 KRT34O76011 436 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 JTBO76095 146 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PRB4P10163 310 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ACPPP15309 386 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PAICSP22234 425 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 RPS6KB1P23443 525 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 AZGP1P25311 298 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ARNTP27540 789 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PPP2R1BP30154 601 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CDC27P30260 824 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 POLR2BP30876 1174 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CD70P32970 193 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 LIPAP38571 399 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PIK3CAP42336 1068 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MTNR1AP48039 350 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MTNR1BP49286 362 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 NPY4RP50391 375 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CRIP2P52943 208 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MAPK10P53779 464 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 GFRA1P56159 465 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 TBX4P57082 545 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 KRTAP10-9P60411 292 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 RELBQ01201 579 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PAX2Q02962 417 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 DDX10Q13206 875 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PWP1Q13610 501 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 USP10Q14694 798 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 POLD3Q15054 466 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 TAF5Q15542 800 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CCNG2Q16589 344 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 FXNQ16595 210 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 NTRK2Q16620 822 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 IFI16Q16666 785 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 TEX44Q53QW1 395 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 RILPL1Q5EBL4 403 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 KHDRBS2Q5VWX1 349 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 DUS1LQ6P1R4 473 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 FIGNL1Q6PIW4 674 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 LINC00322Q6ZN03 302 aaPredicted RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms