RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 HPS1Q92902 700 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 TESCQ96BS2 214 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 LGALS12Q96DT0 336 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 CMTM7Q96FZ5 175 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 COPS8Q99627 209 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 WDR12Q9GZL7 423 aaKnown RBP11.92□□□□□ -0.5
VPS33B-201ENST00000333371 NRG2O14511 850 aaPredicted RBP11.92□□□□□ -0.5
VPS33B-201ENST00000333371 FPR1P21462 350 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 TGM1P22735 817 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 ST13P50502 369 aaKnown RBP11.92□□□□□ -0.5
VPS33B-201ENST00000333371 NUDT6P53370 316 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 LMAN2Q12907 356 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 DGUOKQ16854 277 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 DUOXA1Q1HG43 343 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 FRG2Q64ET8 278 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 DNAJB7Q7Z6W7 309 aaPredicted RBP11.92□□□□□ -0.5
VPS33B-201ENST00000333371 SLC22A16Q86VW1 577 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 ENTHD1Q8IYW4 607 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 SLC39A11Q8N1S5 342 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 LMNTD1Q8N9Z9 388 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 VMP1Q96GC9 406 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 TRMT2BQ96GJ1 504 aaKnown RBP11.92□□□□□ -0.5
VPS33B-201ENST00000333371 TOX2Q96NM4 488 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 FRG2BQ96QU4 278 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 HEPHQ9BQS7 1158 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 ASPSCR1Q9BZE9 553 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 SLIRPQ9GZT3 109 aaKnown RBP11.92□□□□□ -0.5
VPS33B-201ENST00000333371 GABARAPL1Q9H0R8 117 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 MAGEB17A8MXT2 336 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 AQP9O43315 295 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 EPN2O95208 641 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 ETHE1O95571 254 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 ABCB1P08183 1280 aaPredicted RBP11.91□□□□□ -0.5
VPS33B-201ENST00000333371 MAGEA8P43361 318 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 PPP3CCP48454 512 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 CYP4F8P98187 520 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 NPRL3Q12980 569 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 KEAP1Q14145 624 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 HIST2H2ACQ16777 129 aaPredicted RBP11.91□□□□□ -0.5
VPS33B-201ENST00000333371 RETSATQ6NUM9 610 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 SERPINA11Q86U17 422 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 GALNT13Q8IUC8 556 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 OR52J3Q8NH60 311 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 C2orf49Q9BVC5 232 aaPredicted RBP11.91□□□□□ -0.5
VPS33B-201ENST00000333371 ZDHHC3Q9NYG2 299 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 OBSL1O75147 1896 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 TMEM202A6NGA9 273 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 A8MU76 341 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 SEMG1P04279 462 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 GJA1P17302 382 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 IL1RNP18510 177 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 SLC6A12P48065 614 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 RPS3AP61247 264 aaKnown RBP11.91□□□□□ -0.5
VPS33B-201ENST00000333371 CAMK2GQ13555 558 aaPredicted RBP11.91□□□□□ -0.5
VPS33B-201ENST00000333371 CCSMST1Q4G0I0 132 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 KIAA1614Q5VZ46 1190 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 RNF165Q6ZSG1 346 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 SCAMP4Q969E2 229 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 APOL4Q9BPW4 351 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 REEP1Q9H902 201 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 NECTIN3Q9NQS3 549 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 ABCB10Q9NRK6 738 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 RLIMQ9NVW2 624 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 SPG21Q9NZD8 308 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 RBMX2Q9Y388 322 aaKnown RBP11.91□□□□□ -0.5
VPS33B-201ENST00000333371 TESMINQ9Y4I5 508 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 MYO7AQ13402 2215 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 ALPK3Q96L96 1907 aa11.91□□□□□ -0.5
VPS33B-201ENST00000333371 HIST1H2AGP0C0S8 130 aaPredicted RBP11.9□□□□□ -0.5
VPS33B-201ENST00000333371 LAG3P18627 525 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 HIST1H2ADP20671 130 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 RRM2P31350 389 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 GRK5P34947 590 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 SLC19A1P41440 591 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 OR1E2P47887 323 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 PFN3P60673 137 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 RAB33AQ14088 237 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 GPR33Q49SQ1 333 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 IQCCQ4KMZ1 466 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 CBLL1Q75N03 491 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 PLD3Q8IV08 490 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 BBS7Q8IWZ6 715 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 CHCHD4Q8N4Q1 142 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 LILRA3Q8N6C8 439 aaPredicted RBP11.9□□□□□ -0.5
VPS33B-201ENST00000333371 GPR156Q8NFN8 814 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 ASB11Q8WXH4 323 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 HTRA1Q92743 480 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 ZHX1-C8orf76Q96EF9 292 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 HIST1H2AHQ96KK5 128 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 HHIPQ96QV1 700 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 HIST1H2AJQ99878 128 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 H2AFJQ9BTM1 129 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 SLC12A9Q9BXP2 914 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 SMG9Q9H0W8 520 aaKnown RBP11.9□□□□□ -0.5
VPS33B-201ENST00000333371 TPT1P8Q9HAU6 139 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 SLC6A14Q9UN76 642 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 AP3M1Q9Y2T2 418 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 INSL5Q9Y5Q6 135 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 PLXND1Q9Y4D7 1925 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 OR2A25A4D2G3 310 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms