RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 CCDC149Q6ZUS6 474 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 B3GNT8Q7Z7M8 397 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 FAM217AQ8IXS0 508 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ECHDC3Q96DC8 303 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CSF3RQ99062 836 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ZNF556Q9HAH1 456 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ERVW-1Q9UQF0 538 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PCDHGB3Q9Y5G1 929 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 KCNE1BA0A087WTH5 132 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ATG13O75143 517 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 C8AP07357 584 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ACPPP15309 386 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GPX2P18283 190 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GZMMP51124 257 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GP2P55259 537 aaKnown RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CXCR4P61073 352 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 TEAD4Q15561 434 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 POM121L1PQ3SYA9 428 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ZZZ3Q8IYH5 903 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 OR8J2Q8NGG1 315 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 OR4A15Q8NGL6 344 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 TANKQ92844 425 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 REPS1Q96D71 796 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 DEFB118Q96PH6 123 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 YME1L1Q96TA2 773 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 RIOK2Q9BVS4 552 aaKnown RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 RAD18Q9NS91 495 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 RAPGEFL1Q9UHV5 662 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PAIP2BQ9ULR5 123 aaKnown RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 IGLV3-16A0A075B6K0 115 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 TRIM64BA6NI03 449 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 AP2A2O94973 939 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 MT-ND2P03891 347 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 POLR2EP19388 210 aaKnown RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 WEE1P30291 646 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PFN3P60673 137 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 MTAPQ13126 283 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 VEZF1Q14119 521 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 SF1Q15637 639 aaKnown RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 KDM4DQ6B0I6 523 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GPR153Q6NV75 609 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CBLL1Q75N03 491 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 TMPRSS11BQ86T26 416 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 IGFN1Q86VF2 1251 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 FAR1Q8WVX9 515 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 FAM210AQ96ND0 272 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 BARD1Q99728 777 aaKnown RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 HEPHQ9BQS7 1158 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ATAD3AQ9NVI7 634 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PAK1IP1Q9NWT1 392 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 FAM32AQ9Y421 112 aaKnown RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 BOLA2-SMG1P6H3BVE0 249 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GFRA2O00451 464 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 JRKO75564 520 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PTPN6P29350 595 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 VIPR1P32241 457 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ETV3P41162 512 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 IDH2P48735 452 aaKnown RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 VBP1P61758 197 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 RPP38P78345 283 aaKnown RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CREMQ03060 361 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 NPRL3Q12980 569 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CAMK2GQ13555 558 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CLCA4Q14CN2 919 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 HIST2H2ACQ16777 129 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 HIST2H2AA3Q6FI13 130 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 NEK10Q6ZWH5 1172 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 DDX53Q86TM3 631 aaKnown RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 NPAS3Q8IXF0 933 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 IPCEF1Q8WWN9 437 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ZNF566Q969W8 418 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ZHX1-C8orf76Q96EF9 292 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 SH3YL1Q96HL8 342 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 BCL7BQ9BQE9 202 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ZSCAN5AQ9BUG6 496 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 NECTIN3Q9NQS3 549 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 IMPAD1Q9NX62 359 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CORINQ9Y5Q5 1042 aa11.31□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 TANC1Q9C0D5 1861 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 FUOMA2VDF0 154 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 M0QX08 132 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GNRH1P01148 92 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GSTM1P09488 218 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 INHBBP09529 407 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PREPP48147 710 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GSTM4Q03013 218 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 AQP6Q13520 282 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 STARD3Q14849 445 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ZNF648Q5T619 568 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CAPN13Q6MZZ7 669 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 TMEM25Q86YD3 366 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ZNF557Q8N988 423 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CHPT1Q8WUD6 406 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 DACH2Q96NX9 599 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 TRNAU1APQ9NX07 287 aaKnown RBP11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ZNF282Q9UDV7 671 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 MBD1Q9UIS9 605 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 B3GNT3Q9Y2A9 372 aa11.3□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 DYRK1BQ9Y463 629 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms