RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 AFMIDQ63HM1 303 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 OR4F3Q6IEY1 312 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 NLRP8Q86W28 1048 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 KRTCAP2Q8N6L1 136 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 SH3KBP1Q96B97 665 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 OR5M11Q96RB7 305 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 EPYCQ99645 322 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 SGIP1Q9BQI5 828 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 KCNN2Q9H2S1 579 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 UXTQ9UBK9 157 aaPredicted RBP23.58■■□□□ 1.36
SOX1-201ENST00000330949 CCL27Q9Y4X3 112 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 ARL5AQ9Y689 179 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 MMP2P08253 660 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 POU3F3P20264 500 aaPredicted RBP23.57■■□□□ 1.36
SOX1-201ENST00000330949 IDH2P48735 452 aaKnown RBP23.57■■□□□ 1.36
SOX1-201ENST00000330949 LIN7BQ9HAP6 207 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 AASDHPPTQ9NRN7 309 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 AUP1Q9Y679 476 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 IQCMA0A1B0GVH7 501 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 MMP3P08254 477 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 ATF4P18848 351 aaPredicted RBP23.57■■□□□ 1.36
SOX1-201ENST00000330949 ENPP1P22413 925 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 AFF1P51825 1210 aaKnown RBP23.57■■□□□ 1.36
SOX1-201ENST00000330949 PTPRCAPQ14761 206 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 ANGPT1Q15389 498 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 SAXO2Q658L1 398 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 ZNF782Q6ZMW2 699 aaPredicted RBP23.57■■□□□ 1.36
SOX1-201ENST00000330949 GDPGP1Q6ZNW5 385 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 HDDC2Q7Z4H3 204 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 PGBD3Q8N328 593 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 CAMKK1Q8N5S9 505 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 OR8H1Q8NGG4 311 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 BTN2A2Q8WVV5 523 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 MAGEB10Q96LZ2 347 aaPredicted RBP23.57■■□□□ 1.36
SOX1-201ENST00000330949 MAN2B2Q9Y2E5 1009 aa23.57■■□□□ 1.36
SOX1-201ENST00000330949 DPM1O60762 260 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 ATXN1LP0C7T5 689 aaKnown RBP23.56■■□□□ 1.36
SOX1-201ENST00000330949 TALDO1P37837 337 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 LILRA4P59901 499 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 MAB21L1Q13394 359 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 PAN2Q504Q3 1202 aaKnown RBP23.56■■□□□ 1.36
SOX1-201ENST00000330949 MARC1Q5VT66 337 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 BHLHA9Q7RTU4 235 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 VTCN1Q7Z7D3 282 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.56■■□□□ 1.36
SOX1-201ENST00000330949 BRSK1Q8TDC3 778 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 HYLS1Q96M11 299 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 TAPBPLQ9BX59 468 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 OTCP00480 354 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 ESR1P03372 595 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 HOXC5Q00444 222 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 DMC1Q14565 340 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 VEPH1Q14D04 833 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 MANEALQ5VSG8 457 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 RTL3Q8N8U3 475 aaKnown RBP23.56■■□□□ 1.36
SOX1-201ENST00000330949 LPCAT1Q8NF37 534 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 OR13C4Q8NGS5 318 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 ALG5Q9Y673 324 aa23.56■■□□□ 1.36
SOX1-201ENST00000330949 PROM1O43490 865 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 PEX11BO96011 259 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 SSX1Q16384 188 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 GPRC5AQ8NFJ5 357 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 HSH2DQ96JZ2 352 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 SLC7A5P2Q9GIP4 190 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 TRIM45Q9H8W5 580 aaPredicted RBP23.55■■□□□ 1.36
SOX1-201ENST00000330949 AGO3Q9H9G7 860 aaKnown RBP23.55■■□□□ 1.36
SOX1-201ENST00000330949 ADARB2Q9NS39 739 aaKnown RBP23.55■■□□□ 1.36
SOX1-201ENST00000330949 TMEM30AQ9NV96 361 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 LOC285095A0A1B0GVY8 99 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 FABP12A6NFH5 140 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 I3L521 148 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 GPR32O75388 356 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 PAGE1O75459 146 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 SLC22A5O76082 557 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 MSL3P1P0C860 447 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 RAB25P57735 213 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 GOLGA7Q7Z5G4 137 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 SERPINA11Q86U17 422 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 SPATA9Q9BWV2 254 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 PAK6Q9NQU5 681 aaPredicted RBP23.55■■□□□ 1.36
SOX1-201ENST00000330949 SNTG1Q9NSN8 517 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 RWDD3Q9Y3V2 267 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 PCDH1Q08174 1060 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 ERICH5Q6P6B1 374 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 TMC8Q8IU68 726 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 CARNMT1Q8N4J0 409 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 NLGN4YQ8NFZ3 816 aaPredicted RBP23.55■■□□□ 1.36
SOX1-201ENST00000330949 CHTF18Q8WVB6 975 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 DCLRE1CQ96SD1 692 aaKnown RBP23.55■■□□□ 1.36
SOX1-201ENST00000330949 SERHLQ9NQF3 203 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 TAS2R16Q9NYV7 291 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 NUDT4Q9NZJ9 180 aa23.55■■□□□ 1.36
SOX1-201ENST00000330949 OR7A17O14581 309 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 TSPAN12O95859 305 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 IL2P60568 153 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 SRP54P61011 504 aaKnown RBP23.54■■□□□ 1.36
SOX1-201ENST00000330949 MRPL28Q13084 256 aaKnown RBP23.54■■□□□ 1.36
SOX1-201ENST00000330949 MFSD13AQ14CX5 517 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 B3GNT7Q8NFL0 401 aa23.54■■□□□ 1.36
SOX1-201ENST00000330949 AP2M1Q96CW1 435 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms