RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 GABRG2P18507 467 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 CDKN2CP42773 168 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 CYP4F3Q08477 520 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 TPRG1LQ5T0D9 272 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 C10orf62Q5T681 223 aaPredicted RBP16.32■□□□□ 0.2
DDX41-201ENST00000330503 DNAJC14Q6Y2X3 702 aaPredicted RBP16.32■□□□□ 0.2
DDX41-201ENST00000330503 ARMCX6Q7L4S7 300 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 PLCD3Q8N3E9 789 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 LINC01555Q8NAE3 123 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 GPR156Q8NFN8 814 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 DNAJB8Q8NHS0 232 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 FAM3CQ92520 227 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 BMFQ96LC9 184 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 CAMK1GQ96NX5 476 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 OR51B5Q9H339 312 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 RPF2Q9H7B2 306 aaKnown RBP16.32■□□□□ 0.2
DDX41-201ENST00000330503 SIRT5Q9NXA8 310 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 SPATA7Q9P0W8 599 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 ERVK-11Q9UQG0 969 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 BTBD3Q9Y2F9 522 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 TSC22D4Q9Y3Q8 395 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 TCRBV21S2A2A0A5A6 115 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 DHRS12A0PJE2 317 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 YY2O15391 372 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 TIPRLO75663 272 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 TGFB1P01137 390 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 OXTRP30559 389 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 SMAD4Q13485 552 aaKnown RBP16.31■□□□□ 0.2
DDX41-201ENST00000330503 LRIT3Q3SXY7 679 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 FBXO43Q4G163 708 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 SPIN4Q56A73 249 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 GLYATQ6IB77 296 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 GALNT18Q6P9A2 607 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 MSANTD1Q6ZTZ1 278 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 AMIGO2Q86SJ2 522 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 GPR180Q86V85 440 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 TRIM69Q86WT6 500 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 PROSER1Q86XN7 944 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 DTWD1Q8N5C7 304 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 WDR48Q8TAF3 677 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 BIRC7Q96CA5 298 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 CPPED1Q9BRF8 314 aaPredicted RBP16.31■□□□□ 0.2
DDX41-201ENST00000330503 THUMPD3Q9BV44 507 aaKnown RBP16.31■□□□□ 0.2
DDX41-201ENST00000330503 SEMA6AQ9H2E6 1030 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 RMND5AQ9H871 391 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 CUEDC1Q9NWM3 386 aaPredicted RBP16.31■□□□□ 0.2
DDX41-201ENST00000330503 EBF1Q9UH73 591 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 TAC3Q9UHF0 121 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 H0Y8X5 98 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 PSMB5P28074 263 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 PIK3CBP42338 1070 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 KIR3DL1P43629 444 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 HNRNPFP52597 415 aaKnown RBP16.31■□□□□ 0.2
DDX41-201ENST00000330503 GTF2A1P52655 376 aaPredicted RBP16.31■□□□□ 0.2
DDX41-201ENST00000330503 KIAA1024LP59773 190 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 SRSF11Q05519 484 aaKnown RBP16.31■□□□□ 0.2
DDX41-201ENST00000330503 C17orf64Q86WR6 236 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 OR10A6Q8NH74 314 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 SMPDL3AQ92484 453 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 MIEF2Q96C03 454 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 REXO4Q9GZR2 422 aaKnown RBP16.31■□□□□ 0.2
DDX41-201ENST00000330503 PRDM8Q9NQV8 689 aa16.31■□□□□ 0.2
DDX41-201ENST00000330503 EXO1Q9UQ84 846 aaKnown RBP16.31■□□□□ 0.2
DDX41-201ENST00000330503 PRAMEF33A0A0G2JMD5 474 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 GABRR3A8MPY1 467 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 LAMP1P11279 417 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 IDSP22304 550 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 TIA1P31483 386 aaKnown RBP eCLIP16.3■□□□□ 0.2
DDX41-201ENST00000330503 GZMMP51124 257 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 ANKRD26P1Q6NSI1 321 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 TMIGD1Q6UXZ0 262 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 PHACTR4Q8IZ21 702 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 C10orf111Q8N326 155 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 ABHD11Q8NFV4 315 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 OR8J2Q8NGG1 315 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 OR1E3Q8WZA6 343 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 UBE2E3Q969T4 207 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 AURKBQ96GD4 344 aaPredicted RBP16.3■□□□□ 0.2
DDX41-201ENST00000330503 EFHD1Q9BUP0 239 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 PHF7Q9BWX1 381 aaPredicted RBP16.3■□□□□ 0.2
DDX41-201ENST00000330503 XKR8Q9H6D3 395 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 PELI2Q9HAT8 420 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 IMP3Q9NV31 184 aaKnown RBP16.3■□□□□ 0.2
DDX41-201ENST00000330503 SCHIP1Q9P0W5 487 aaPredicted RBP16.3■□□□□ 0.2
DDX41-201ENST00000330503 PRSS38A1L453 326 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 OR52A4PA6NMU1 304 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 C10orf142B7Z368 130 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 SAP18O00422 153 aaKnown RBP16.3■□□□□ 0.2
DDX41-201ENST00000330503 TBX6O95947 436 aaPredicted RBP16.3■□□□□ 0.2
DDX41-201ENST00000330503 C1QCP02747 245 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 COX7A2P14406 83 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 GGT1P19440 569 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 SFSWAPQ12872 951 aaKnown RBP16.3■□□□□ 0.2
DDX41-201ENST00000330503 DPY19L1Q2PZI1 675 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 UAP1L1Q3KQV9 507 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 AASDHQ4L235 1098 aaPredicted RBP16.3■□□□□ 0.2
DDX41-201ENST00000330503 TBCELQ5QJ74 424 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 ERMP1Q7Z2K6 904 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 CALHM3Q86XJ0 350 aa16.3■□□□□ 0.2
DDX41-201ENST00000330503 DENND6BQ8NEG7 585 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms