RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 HUS1BQ8NHY5 278 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 WFIKKN2Q8TEU8 576 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 CHTF18Q8WVB6 975 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 STARD8Q92502 1023 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 SGCDQ92629 289 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 SH3KBP1Q96B97 665 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 DUSP26Q9BV47 211 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 NAA50Q9GZZ1 169 aaKnown RBP14.06□□□□□ -0.16
TPM3-206ENST00000330188 ADNPQ9H2P0 1102 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 EPHX3Q9H6B9 360 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 FANCEQ9HB96 536 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 IL1RAPQ9NPH3 570 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 ABCG2Q9UNQ0 655 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 H3BM21 787 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 LILRB5O75023 590 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 C1orf105O95561 183 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 KDELR2P33947 212 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 ST8SIA6P61647 398 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 CD47Q08722 323 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 MESP2Q0VG99 397 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 GRSF1Q12849 480 aaKnown RBP eCLIP14.06□□□□□ -0.16
TPM3-206ENST00000330188 BIRC2Q13490 618 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 BCL7AQ4VC05 210 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 XAF1Q6GPH4 301 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 LAIR2Q6ISS4 152 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 SLCO4C1Q6ZQN7 724 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 GALNT10Q86SR1 603 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 TRIM74Q86UV6 250 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 TERB1Q8NA31 727 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 ZNF480Q8WV37 535 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 NEIL2Q969S2 332 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 CNDP2Q96KP4 475 aaKnown RBP14.06□□□□□ -0.16
TPM3-206ENST00000330188 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 RAD9AQ99638 391 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 BARD1Q99728 777 aaKnown RBP14.06□□□□□ -0.16
TPM3-206ENST00000330188 DPH2Q9BQC3 489 aaPredicted RBP14.06□□□□□ -0.16
TPM3-206ENST00000330188 GABARAPL1Q9H0R8 117 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 PCDHB11Q9Y5F2 797 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 PCM1Q15154 2024 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 TCF20Q9UGU0 1960 aaKnown RBP14.06□□□□□ -0.16
TPM3-206ENST00000330188 GABRR3A8MPY1 467 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 TMX2-CTNND1H3BSU7 103 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 SLC16A6O15403 523 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 HOXC11O43248 304 aaPredicted RBP14.05□□□□□ -0.16
TPM3-206ENST00000330188 ANXA4P09525 319 aaPredicted RBP14.05□□□□□ -0.16
TPM3-206ENST00000330188 EFNA1P20827 205 aaPredicted RBP14.05□□□□□ -0.16
TPM3-206ENST00000330188 ASMTP46597 345 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 RAD23AP54725 363 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 SKIV2LQ15477 1246 aaKnown RBP14.05□□□□□ -0.16
TPM3-206ENST00000330188 HKDC1Q2TB90 917 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 RFX4Q33E94 735 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 ZC3H12BQ5HYM0 836 aaKnown RBP14.05□□□□□ -0.16
TPM3-206ENST00000330188 ZNF691Q5VV52 312 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 XKR5Q6UX68 686 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 CAMKMTQ7Z624 323 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 SPRED2Q7Z698 418 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 TMPRSS11BQ86T26 416 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 CPA6Q8N4T0 437 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 FBXO15Q8NCQ5 510 aaPredicted RBP14.05□□□□□ -0.16
TPM3-206ENST00000330188 NXPE3Q969Y0 559 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 RSPRY1Q96DX4 576 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 SAMD11Q96NU1 681 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 DCUN1D5Q9BTE7 237 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 RPS6KA6Q9UK32 745 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 KCNE2Q9Y6J6 123 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 LAMA3Q16787 3333 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 TRIM64BA6NI03 449 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 K7ESM1 405 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 PRNPP04156 253 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 MATN1P21941 496 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 GABARAPL2P60520 117 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 ISL1P61371 349 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 RPS13P62277 151 aaKnown RBP14.05□□□□□ -0.16
TPM3-206ENST00000330188 TBPL1P62380 186 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 GTF2H3Q13889 308 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 CAMK1Q14012 370 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 C16orf72Q14CZ0 275 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 SPIN4Q56A73 249 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 OR2T5Q6IEZ7 315 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 CBLL1Q75N03 491 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 CEP68Q76N32 757 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 SYNPOQ8N3V7 929 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 OR2T29Q8NH02 315 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 ARRDC3Q96B67 414 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 ZNF707Q96C28 371 aaPredicted RBP14.05□□□□□ -0.16
TPM3-206ENST00000330188 CHST8Q9H2A9 424 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 TPT1P8Q9HAU6 139 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 TM9SF3Q9HD45 589 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 BTNL2Q9UIR0 455 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 SH2B3Q9UQQ2 575 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 SLC27A6Q9Y2P4 619 aa14.05□□□□□ -0.16
TPM3-206ENST00000330188 MUC22E2RYF6 1773 aaPredicted RBP14.05□□□□□ -0.16
TPM3-206ENST00000330188 C1orf226A1L170 272 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 PRRT4C9JH25 899 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 ZNF197O14709 1029 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 MITFO75030 526 aaPredicted RBP14.04□□□□□ -0.16
TPM3-206ENST00000330188 SEC14L2O76054 403 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 HTR1AP08908 422 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 ITGAMP11215 1152 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 AGXTP21549 392 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms