RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 NPPBP16860 134 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 S100A1P23297 94 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 PKLRP30613 574 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 SLC5A2P31639 672 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 TTKP33981 857 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 HOXD12P35452 270 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 CSNK1EP49674 416 aaKnown RBP12.3□□□□□ -0.44
DDX39A-202ENST00000324340 RAB28P51157 221 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 PRKG2Q13237 762 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 FASTKQ14296 549 aaKnown RBP12.3□□□□□ -0.44
DDX39A-202ENST00000324340 KIR2DS5Q14953 304 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 TRIP10Q15642 601 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 CLPPQ16740 277 aaPredicted RBP12.3□□□□□ -0.44
DDX39A-202ENST00000324340 ZNF423Q2M1K9 1284 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 PLK5Q496M5 336 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 ZNF542PQ5EBM4 170 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 PRAMEF9Q5VWM5 478 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 PEAR1Q5VY43 1037 aaPredicted RBP12.3□□□□□ -0.44
DDX39A-202ENST00000324340 LIPJQ5W064 366 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 LCTLQ6UWM7 567 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 ARMCX6Q7L4S7 300 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 TICAM1Q8IUC6 712 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 PQLC1Q8N2U9 271 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 SDR16C5Q8N3Y7 309 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 CDYL2Q8N8U2 506 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 OR52E1Q8NGJ3 308 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 OR2L8Q8NGY9 312 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 BORCS5Q969J3 196 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 CMTM5Q96DZ9 223 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 C19orf60Q96EN9 201 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 WDR34Q96EX3 536 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 OR52B2Q96RD2 323 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 YIPF2Q9BWQ6 316 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 CAAP1Q9H8G2 361 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 ACTR8Q9H981 624 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 TCF7L2Q9NQB0 619 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 CCDC177Q9NQR7 707 aaPredicted RBP12.3□□□□□ -0.44
DDX39A-202ENST00000324340 PLAGL1Q9UM63 463 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 FIS1Q9Y3D6 152 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 TIMM22Q9Y584 194 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 KCNE2Q9Y6J6 123 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 ABCA7Q8IZY2 2146 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 PIP5K1BO14986 540 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 CRCPO75575 148 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 CHEK2O96017 543 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 CELA2BP08218 269 aaPredicted RBP12.3□□□□□ -0.44
DDX39A-202ENST00000324340 SLC2A4P14672 509 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 JUPP14923 745 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 SLC19A1P41440 591 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 RELAQ04206 551 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 ZNF33BQ06732 778 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 CHIT1Q13231 466 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 SRSF5Q13243 272 aaKnown RBP12.3□□□□□ -0.44
DDX39A-202ENST00000324340 ELOCQ15369 112 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 TLR1Q15399 786 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 TEAD4Q15561 434 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 LSM12Q3MHD2 195 aaKnown RBP12.3□□□□□ -0.44
DDX39A-202ENST00000324340 PRRT3Q5FWE3 981 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 XKR7Q5GH72 579 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 FAM219BQ5XKK7 198 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 LARP4Q71RC2 724 aaKnown RBP eCLIP12.3□□□□□ -0.445e-6■■■□□ 15.1
DDX39A-202ENST00000324340 TAF8Q7Z7C8 310 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 ALYREFQ86V81 257 aaKnown RBP12.3□□□□□ -0.44
DDX39A-202ENST00000324340 DCBLD1Q8N8Z6 715 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 LINC01555Q8NAE3 123 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 CEP70Q8NHQ1 597 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 METTL6Q8TCB7 284 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 SMPDL3AQ92484 453 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 USP7Q93009 1102 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 EFHD2Q96C19 240 aaPredicted RBP12.3□□□□□ -0.44
DDX39A-202ENST00000324340 C3orf30Q96M34 536 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 RILPQ96NA2 401 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 IL17FQ96PD4 163 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 SERPINI1Q99574 410 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 PCBD2Q9H0N5 130 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 EHD1Q9H4M9 534 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 WDR55Q9H6Y2 383 aaPredicted RBP12.3□□□□□ -0.44
DDX39A-202ENST00000324340 PFDN4Q9NQP4 134 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 POT1Q9NUX5 634 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 ZSCAN32Q9NX65 697 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 SPASTQ9UBP0 616 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 SUSD2Q9UGT4 822 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 PILRBQ9UKJ0 227 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 ICKQ9UPZ9 632 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 B3GNT3Q9Y2A9 372 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 RNF11Q9Y3C5 154 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 KMT2EQ8IZD2 1858 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 A0A1W2PPV9 198 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 SERTM1A2A2V5 107 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 E7EQ34 232 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 SLC22A2O15244 555 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 VPS4BO75351 444 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 PGM3O95394 542 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 PRR35P0CG20 571 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 GNSP15586 552 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 PEX2P28328 305 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 EPHA3P29320 983 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 AVPR2P30518 371 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 HMOX2P30519 316 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 SHMT2P34897 504 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms