RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CLIP4Q8N3C7 705 aa12.64□□□□□ -0.39
CPNE1-201ENST00000317677 SMRP1Q8NCR6 262 aa12.64□□□□□ -0.39
CPNE1-201ENST00000317677 ASB11Q8WXH4 323 aa12.64□□□□□ -0.39
CPNE1-201ENST00000317677 FOXJ1Q92949 421 aa12.64□□□□□ -0.39
CPNE1-201ENST00000317677 NPAS2Q99743 824 aa12.64□□□□□ -0.39
CPNE1-201ENST00000317677 EGFL8Q99944 293 aa12.64□□□□□ -0.39
CPNE1-201ENST00000317677 NPAP1Q9NZP6 1156 aa12.64□□□□□ -0.39
CPNE1-201ENST00000317677 CD300AQ9UGN4 299 aa12.64□□□□□ -0.39
CPNE1-201ENST00000317677 PCDHGA7Q9Y5G6 932 aa12.64□□□□□ -0.39
CPNE1-201ENST00000317677 TNPO3Q9Y5L0 923 aaKnown RBP12.64□□□□□ -0.39
CPNE1-201ENST00000317677 MN1Q10571 1320 aaPredicted RBP12.64□□□□□ -0.39
CPNE1-201ENST00000317677 A6NL46 340 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 B8ZZF3 427 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 GFYI3L273 518 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 SNPHO15079 494 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 LILRB5O75023 590 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 GSNP06396 782 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 CAPN1P07384 714 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 GSTM2P28161 218 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 PKLRP30613 574 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 ATP4BP51164 291 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 TAS2R38P59533 333 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 PSME3P61289 254 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 TMEM115Q12893 351 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-201ENST00000317677 EIF2B5Q13144 721 aaKnown RBP12.63□□□□□ -0.39
CPNE1-201ENST00000317677 FASTKQ14296 549 aaKnown RBP12.63□□□□□ -0.39
CPNE1-201ENST00000317677 AGKQ53H12 422 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 CEP78Q5JTW2 689 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 BROXQ5VW32 411 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 XAF1Q6GPH4 301 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 CES5AQ6NT32 575 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 Q6ZSR9 355 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 UBE2R2Q712K3 238 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-201ENST00000317677 NLRP8Q86W28 1048 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 CACUL1Q86Y37 369 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 ZCCHC7Q8N3Z6 543 aaKnown RBP12.63□□□□□ -0.39
CPNE1-201ENST00000317677 CBR4Q8N4T8 237 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 AADATQ8N5Z0 425 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 RNF148Q8N7C7 305 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 ELMO1Q92556 727 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 TRMT61BQ9BVS5 477 aaKnown RBP12.63□□□□□ -0.39
CPNE1-201ENST00000317677 SLC12A9Q9BXP2 914 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 IPPKQ9H8X2 491 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 CCM2LQ9NUG4 571 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-201ENST00000317677 WWOXQ9NZC7 414 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 FAM8A1Q9UBU6 413 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 K7EQS6 105 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 KATNA1O75449 491 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 SLCO2B1O94956 709 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 KCNH1O95259 989 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 RASAL1O95294 804 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 CDH1P12830 882 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 POLR2IP36954 125 aaKnown RBP12.63□□□□□ -0.39
CPNE1-201ENST00000317677 CASP3P42574 277 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 PRLHRP49683 370 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 ZP2Q05996 745 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 ELP6Q0PNE2 266 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 ATP6AP1Q15904 470 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 LDLRAP1Q5SW96 308 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 CCNJQ5T5M9 372 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 IDO2Q6ZQW0 420 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 ZNF765Q7L2R6 523 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 RAVER1Q8IY67 606 aaKnown RBP12.63□□□□□ -0.39
CPNE1-201ENST00000317677 NATD1Q8N6N6 113 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 TUBGCP3Q96CW5 907 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 NUS1Q96E22 293 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 P2RY13Q9BPV8 354 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 HDAC8Q9BY41 377 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 FANCEQ9HB96 536 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 CCDC167Q9P0B6 97 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 IFT80Q9P2H3 777 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-201ENST00000317677 SERGEFQ9UGK8 458 aa12.63□□□□□ -0.39
CPNE1-201ENST00000317677 PCYT1BQ9Y5K3 369 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-201ENST00000317677 SLC5A10A0PJK1 596 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 ZSCAN5BA6NJL1 495 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 SAC3D1A6NKF1 404 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 H0YAE9 185 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 ABCB7O75027 752 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 CRCPO75575 148 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 APODP05090 189 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 HGFP14210 728 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 POLR2CP19387 275 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-201ENST00000317677 CD40LGP29965 261 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 KIR2DL1P43626 348 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-201ENST00000317677 ZFP36L2P47974 494 aaKnown RBP12.62□□□□□ -0.39
CPNE1-201ENST00000317677 PREPP48147 710 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 RPIAP49247 311 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 PPP5CP53041 499 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 DIO3P55073 304 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 PPP2R2BQ00005 443 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 HTR4Q13639 388 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 NPTX1Q15818 432 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 DUSP7Q16829 419 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.62□□□□□ -0.39
CPNE1-201ENST00000317677 DHRSXQ8N5I4 330 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 PLA2G15Q8NCC3 412 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 OR6Q1Q8NGQ2 317 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 GRPEL2Q8TAA5 225 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 PPP1R16AQ96I34 528 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 HBEGFQ99075 208 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms