RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 DDX28Q9NUL7 540 aaKnown RBP13.02□□□□□ -0.33
SKA3-202ENST00000314759 ARL15Q9NXU5 204 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 ZNF221Q9UK13 617 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 LOC100506127A0A0U1RQW1 187 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 FAM172BPA6NC97 362 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 SLC38A8A6NNN8 435 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 SCN2BO60939 215 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 COL6A1P12109 1028 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 RPIAP49247 311 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 CRYBA2P53672 197 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 RHOAP61586 193 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 MTAPQ13126 283 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 CCDC58Q4VC31 144 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 MACC1Q6ZN28 852 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 SLC46A3Q7Z3Q1 461 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 FAM124AQ86V42 546 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 FAM9CQ8IZT9 166 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 RNF175Q8N4F7 328 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 AMER2Q8N7J2 671 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 GGHQ92820 318 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 EBPLQ9BY08 206 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 GABARAPL3Q9BY60 117 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 OR2B2Q9GZK3 357 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 PLSCR3Q9NRY6 295 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 ADPRHL2Q9NX46 363 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 ZNF451Q9Y4E5 1061 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 A3GALT2U3KPV4 340 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 TRBV5-4A0A0C4DH59 114 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 SCO2O43819 266 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 AMD1P17707 334 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 ITGALP20701 1170 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 WNT3P56703 355 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 OR2B6P58173 313 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 ZNF45Q02386 682 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 ARMC12Q5T9G4 340 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 CHST9Q7L1S5 443 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 GPR155Q7Z3F1 870 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 DNAJC22Q8N4W6 341 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 WBP2Q969T9 261 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 FAM193BQ96PV7 902 aaPredicted RBP13.01□□□□□ -0.33
SKA3-202ENST00000314759 OR51E2Q9H255 320 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 TRMT13Q9NUP7 481 aaKnown RBP13.01□□□□□ -0.33
SKA3-202ENST00000314759 TMEM184CQ9NVA4 438 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 AFF4Q9UHB7 1163 aaKnown RBP13.01□□□□□ -0.33
SKA3-202ENST00000314759 PCDHGB6Q9Y5F9 930 aa13.01□□□□□ -0.33
SKA3-202ENST00000314759 PDZK1P1A8MUH7 402 aa13□□□□□ -0.33
SKA3-202ENST00000314759 MAGEB17A8MXT2 336 aa13□□□□□ -0.33
SKA3-202ENST00000314759 EIF3FO00303 357 aaPredicted RBP13□□□□□ -0.33
SKA3-202ENST00000314759 YY2O15391 372 aa13□□□□□ -0.33
SKA3-202ENST00000314759 COCHO43405 550 aa13□□□□□ -0.33
SKA3-202ENST00000314759 PRAMEF4O60810 478 aa13□□□□□ -0.33
SKA3-202ENST00000314759 STC2O76061 302 aa13□□□□□ -0.33
SKA3-202ENST00000314759 EPN2O95208 641 aa13□□□□□ -0.33
SKA3-202ENST00000314759 CLDN7O95471 211 aa13□□□□□ -0.33
SKA3-202ENST00000314759 EOMESO95936 686 aa13□□□□□ -0.33
SKA3-202ENST00000314759 RPLP2P05387 115 aaKnown RBP13□□□□□ -0.33
SKA3-202ENST00000314759 PRKCAP17252 672 aa13□□□□□ -0.33
SKA3-202ENST00000314759 PRPH2P23942 346 aa13□□□□□ -0.33
SKA3-202ENST00000314759 HTR3AP46098 478 aa13□□□□□ -0.33
SKA3-202ENST00000314759 PRKCDQ05655 676 aa13□□□□□ -0.33
SKA3-202ENST00000314759 CHRNA6Q15825 494 aa13□□□□□ -0.33
SKA3-202ENST00000314759 UGT8Q16880 541 aa13□□□□□ -0.33
SKA3-202ENST00000314759 PRAMEF9Q5VWM5 478 aa13□□□□□ -0.33
SKA3-202ENST00000314759 NOXRED1Q6NXP6 359 aa13□□□□□ -0.33
SKA3-202ENST00000314759 ERICH5Q6P6B1 374 aa13□□□□□ -0.33
SKA3-202ENST00000314759 CLECL1Q8IZS7 167 aa13□□□□□ -0.33
SKA3-202ENST00000314759 ASCC1Q8N9N2 400 aaKnown RBP13□□□□□ -0.33
SKA3-202ENST00000314759 CHAC2Q8WUX2 184 aa13□□□□□ -0.33
SKA3-202ENST00000314759 MYO19Q96H55 970 aa13□□□□□ -0.33
SKA3-202ENST00000314759 Q96MT0 163 aa13□□□□□ -0.33
SKA3-202ENST00000314759 CRLS1Q9UJA2 301 aa13□□□□□ -0.33
SKA3-202ENST00000314759 CLCA1A8K7I4 914 aa13□□□□□ -0.33
SKA3-202ENST00000314759 A8MX80 341 aa13□□□□□ -0.33
SKA3-202ENST00000314759 K7ERQ8 282 aa13□□□□□ -0.33
SKA3-202ENST00000314759 ZW10O43264 779 aa13□□□□□ -0.33
SKA3-202ENST00000314759 TLL1O43897 1013 aa13□□□□□ -0.33
SKA3-202ENST00000314759 CPSF4O95639 269 aaKnown RBP13□□□□□ -0.33
SKA3-202ENST00000314759 RPLP0P05388 317 aaKnown RBP13□□□□□ -0.33
SKA3-202ENST00000314759 CDK1P06493 297 aa13□□□□□ -0.33
SKA3-202ENST00000314759 NUDT7P0C024 238 aa13□□□□□ -0.33
SKA3-202ENST00000314759 BPIP17213 487 aa13□□□□□ -0.33
SKA3-202ENST00000314759 MAPK1P28482 360 aa13□□□□□ -0.33
SKA3-202ENST00000314759 CRISP3P54108 245 aa13□□□□□ -0.33
SKA3-202ENST00000314759 KCNJ10P78508 379 aa13□□□□□ -0.33
SKA3-202ENST00000314759 ADGRF1Q5T601 910 aa13□□□□□ -0.33
SKA3-202ENST00000314759 MSANTD1Q6ZTZ1 278 aa13□□□□□ -0.33
SKA3-202ENST00000314759 ARMCX6Q7L4S7 300 aa13□□□□□ -0.33
SKA3-202ENST00000314759 ZNF675Q8TD23 568 aa13□□□□□ -0.33
SKA3-202ENST00000314759 LINC01599Q8WXQ3 324 aa13□□□□□ -0.33
SKA3-202ENST00000314759 NEDD4LQ96PU5 975 aa13□□□□□ -0.33
SKA3-202ENST00000314759 SDHCQ99643 169 aaPredicted RBP13□□□□□ -0.33
SKA3-202ENST00000314759 EPYCQ99645 322 aa13□□□□□ -0.33
SKA3-202ENST00000314759 TTPALQ9BTX7 342 aa13□□□□□ -0.33
SKA3-202ENST00000314759 CENPOQ9BU64 300 aa13□□□□□ -0.33
SKA3-202ENST00000314759 TM6SF2Q9BZW4 377 aa13□□□□□ -0.33
SKA3-202ENST00000314759 CWH43Q9H720 699 aa13□□□□□ -0.33
SKA3-202ENST00000314759 PLCXD1Q9NUJ7 323 aa13□□□□□ -0.33
SKA3-202ENST00000314759 FKBP14Q9NWM8 211 aa13□□□□□ -0.33
SKA3-202ENST00000314759 EHD3Q9NZN3 535 aa13□□□□□ -0.33
SKA3-202ENST00000314759 GPSM3Q9Y4H4 160 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms