RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 BAG2O95816 211 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 TNFP01375 233 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 PTX3P26022 381 aaPredicted RBP16.1■□□□□ 0.17
CLCF1-201ENST00000312438 AK4P27144 223 aaPredicted RBP16.1■□□□□ 0.17
CLCF1-201ENST00000312438 PRDX1Q06830 199 aaKnown RBP16.1■□□□□ 0.17
CLCF1-201ENST00000312438 KIAA2013Q8IYS2 634 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 DEFB123Q8N688 67 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 C1orf52Q8N6N3 182 aaKnown RBP16.1■□□□□ 0.17
CLCF1-201ENST00000312438 ZNF740Q8NDX6 193 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 OR13H1Q8NG92 308 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 OR4K1Q8NGD4 311 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 GTF2H4Q92759 462 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 CGREF1Q99674 301 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 EBPLQ9BY08 206 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 SPNS1Q9H2V7 528 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 XKR8Q9H6D3 395 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 KIR3DX1Q9H7L2 352 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 NT5DC2Q9H857 520 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 MAPRE3Q9UPY8 281 aa16.1■□□□□ 0.17
CLCF1-201ENST00000312438 A0A1W2PPC4 97 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 TGFB1P01137 390 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 ACTR1BP42025 376 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 ASMTP46597 345 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 EEFSECP57772 596 aaKnown RBP16.09■□□□□ 0.17
CLCF1-201ENST00000312438 SESN3P58005 492 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 C21orf58P58505 322 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 ACTR1AP61163 376 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 YBX1P67809 324 aaKnown RBP16.09■□□□□ 0.17
CLCF1-201ENST00000312438 RBBP5Q15291 538 aaKnown RBP16.09■□□□□ 0.17
CLCF1-201ENST00000312438 DPY19L1Q2PZI1 675 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 ZFP1Q6P2D0 407 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 GALNT18Q6P9A2 607 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 CCL4L1Q8NHW4 92 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 FAM174AQ8TBP5 190 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 STARD8Q92502 1023 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 FOXQ1Q9C009 403 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 RHBGQ9H310 441 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 RMND5AQ9H871 391 aa16.09■□□□□ 0.17
CLCF1-201ENST00000312438 PNMA8BQ9ULN7 279 aaPredicted RBP16.09■□□□□ 0.17
CLCF1-201ENST00000312438 IGHV1OR15-9A0A0B4J2B8 117 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 ANKDD1BA6NHY2 528 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 H7BY64 318 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 SH3BGRLO75368 114 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 ANXA4P09525 319 aaPredicted RBP16.08■□□□□ 0.17
CLCF1-201ENST00000312438 RAE1P78406 368 aaKnown RBP16.08■□□□□ 0.17
CLCF1-201ENST00000312438 SRSF11Q05519 484 aaKnown RBP16.08■□□□□ 0.17
CLCF1-201ENST00000312438 BNIP2Q12982 314 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 RABL3Q5HYI8 236 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 ICE2Q659A1 982 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 GPR180Q86V85 440 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 DHFR2Q86XF0 187 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 SIX5Q8N196 739 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 OR8J3Q8NGG0 315 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 OR2A1Q8NGT9 310 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 RLN3Q8WXF3 142 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 PRAP1Q96NZ9 151 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 CUEDC1Q9NWM3 386 aaPredicted RBP16.08■□□□□ 0.17
CLCF1-201ENST00000312438 ICKQ9UPZ9 632 aa16.08■□□□□ 0.17
CLCF1-201ENST00000312438 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.08■□□□□ 0.17
CLCF1-201ENST00000312438 LRATO95237 230 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 PSMB5P28074 263 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 SERPINB1P30740 379 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 ATXN3P54252 364 aaPredicted RBP16.08■□□□□ 0.16
CLCF1-201ENST00000312438 PHC1P78364 1004 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 ILF3Q12906 894 aaKnown RBP eCLIP16.08■□□□□ 0.16
CLCF1-201ENST00000312438 PGS1Q32NB8 556 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 C6orf10Q5SRN2 563 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 SLC30A9Q6PML9 568 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 MSANTD1Q6ZTZ1 278 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 SPATA24Q86W54 205 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 PHACTR4Q8IZ21 702 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 FRMD1Q8N878 549 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 ZUFSPQ96AP4 578 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 PPM1MQ96MI6 270 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 SH3GL1Q99961 368 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 TPSD1Q9BZJ3 242 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 KCNH6Q9H252 994 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 OR51B5Q9H339 312 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 ALG2Q9H553 416 aa16.08■□□□□ 0.16
CLCF1-201ENST00000312438 DOCK9Q9BZ29 2069 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 PRAMEF33A0A0G2JMD5 474 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 PRICKLE3O43900 615 aaPredicted RBP16.07■□□□□ 0.16
CLCF1-201ENST00000312438 DNAJA2O60884 412 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 ERN1O75460 977 aaKnown RBP16.07■□□□□ 0.16
CLCF1-201ENST00000312438 EML2O95834 649 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 F3P13726 295 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 TIA1P31483 386 aaKnown RBP eCLIP16.07■□□□□ 0.16
CLCF1-201ENST00000312438 VHLP40337 213 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 KIR3DL1P43629 444 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 ABATP80404 500 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 REEP5Q00765 189 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 RHDQ02161 417 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 LIPEQ05469 1076 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 ZP2Q05996 745 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 MTAPQ13126 283 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 SF1Q15637 639 aaKnown RBP16.07■□□□□ 0.16
CLCF1-201ENST00000312438 LRRC74BQ6ZQY2 392 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 NRROSQ86YC3 692 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 GJD3Q8N144 294 aa16.07■□□□□ 0.16
CLCF1-201ENST00000312438 SLC22A18ASQ8N1D0 253 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms