RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 TNFRSF11BO00300 401 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 FPGTO14772 594 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 TEX28O15482 410 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 CXCL14O95715 111 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 SERPINA4P29622 427 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 DCTP40126 519 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 QPRTQ15274 297 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 ADPRMQ3LIE5 342 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 UGT3A2Q3SY77 523 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 RUNDC3AQ59EK9 446 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 PPP2R2DQ66LE6 453 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 ADNP2Q6IQ32 1131 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 TXNDC11Q6PKC3 985 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 TMEM25Q86YD3 366 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 OR5AK3PQ8NH89 298 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 ZNF296Q8WUU4 475 aaPredicted RBP12.28□□□□□ -0.44
RETREG3-201ENST00000309428 CDK5RAP1Q96SZ6 601 aaKnown RBP12.28□□□□□ -0.44
RETREG3-201ENST00000309428 TCF25Q9BQ70 676 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 YTHDF1Q9BYJ9 559 aaKnown RBP12.28□□□□□ -0.44
RETREG3-201ENST00000309428 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.28□□□□□ -0.44
RETREG3-201ENST00000309428 AASDHPPTQ9NRN7 309 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 NKIRAS2Q9NYR9 191 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 SPEF1Q9Y4P9 236 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 PCDHB14Q9Y5E9 798 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 WDR90Q96KV7 1748 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 EYSQ5T1H1 3165 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 SLC35F4A4IF30 521 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 ZNF197O14709 1029 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 KDELR3O43731 214 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 SOX14O95416 240 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 VNN2O95498 520 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 TACR1P25103 407 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 CD40LGP29965 261 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 ELP6Q0PNE2 266 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 LMAN2Q12907 356 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 CDK5R2Q13319 367 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 TUBA3CQ13748 450 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 TTLL9Q3SXZ7 439 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 XKR6Q5GH73 641 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 OR2T5Q6IEZ7 315 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 SUSD1Q6UWL2 747 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 RGL4Q8IZJ4 473 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 OR2T29Q8NH02 315 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 NETO1Q8TDF5 533 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 PIH1D2Q8WWB5 315 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 TRIM63Q969Q1 353 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 EID2BQ96D98 161 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 TCEAL4Q96EI5 215 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 OR51E2Q9H255 320 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 OSGEPL1Q9H4B0 414 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 ZNF222Q9UK12 451 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 CLCA3PQ9Y6N3 262 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 ALPK2Q86TB3 2170 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 GSAPA4D1B5 854 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 H0YAE9 185 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 STK16O75716 305 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 IGSF6O95976 241 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 RPLP0P05388 317 aaKnown RBP12.28□□□□□ -0.44
RETREG3-201ENST00000309428 C8AP07357 584 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 RACK1P63244 317 aaKnown RBP12.28□□□□□ -0.44
RETREG3-201ENST00000309428 NOGQ13253 232 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 MTA1Q13330 715 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 PON2Q15165 354 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 PTCHD3Q3KNS1 767 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 ERAP2Q6P179 960 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 ZNF517Q6ZMY9 492 aaPredicted RBP12.28□□□□□ -0.44
RETREG3-201ENST00000309428 KRT74Q7RTS7 529 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 ADAMTSL2Q86TH1 951 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 CACTIN-AS1Q8N1I8 211 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 ZBTB2Q8N680 514 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 SH3KBP1Q96B97 665 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 CCNB1IP1Q9NPC3 277 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 PLAGL1Q9UM63 463 aa12.28□□□□□ -0.44
RETREG3-201ENST00000309428 TNPO3Q9Y5L0 923 aaKnown RBP12.28□□□□□ -0.44
RETREG3-201ENST00000309428 BPIP17213 487 aa12.27□□□□□ -0.44
RETREG3-201ENST00000309428 SSTR4P31391 388 aa12.27□□□□□ -0.44
RETREG3-201ENST00000309428 ZNF140P52738 457 aaPredicted RBP12.27□□□□□ -0.44
RETREG3-201ENST00000309428 MAD2L1Q13257 205 aaPredicted RBP12.27□□□□□ -0.44
RETREG3-201ENST00000309428 C1DQ13901 141 aaKnown RBP12.27□□□□□ -0.44
RETREG3-201ENST00000309428 NFE2L1Q14494 772 aa12.27□□□□□ -0.44
RETREG3-201ENST00000309428 CASP12Q6UXS9 341 aa12.27□□□□□ -0.44
RETREG3-201ENST00000309428 C12orf76Q8N812 135 aaPredicted RBP12.27□□□□□ -0.44
RETREG3-201ENST00000309428 ASCC1Q8N9N2 400 aaKnown RBP12.27□□□□□ -0.44
RETREG3-201ENST00000309428 GPR26Q8NDV2 337 aa12.27□□□□□ -0.44
RETREG3-201ENST00000309428 ZNF486Q96H40 463 aaPredicted RBP12.27□□□□□ -0.44
RETREG3-201ENST00000309428 IGSF21Q96ID5 467 aa12.27□□□□□ -0.44
RETREG3-201ENST00000309428 ZNF641Q96N77 438 aaPredicted RBP12.27□□□□□ -0.44
RETREG3-201ENST00000309428 INPP5KQ9BT40 448 aa12.27□□□□□ -0.44
RETREG3-201ENST00000309428 MMP28Q9H239 520 aa12.27□□□□□ -0.44
RETREG3-201ENST00000309428 TRIT1Q9H3H1 467 aaKnown RBP12.27□□□□□ -0.44
RETREG3-201ENST00000309428 GPR83Q9NYM4 423 aa12.27□□□□□ -0.44
RETREG3-201ENST00000309428 ZNF624Q9P2J8 865 aaPredicted RBP12.27□□□□□ -0.44
RETREG3-201ENST00000309428 TRPC4Q9UBN4 977 aa12.27□□□□□ -0.44
RETREG3-201ENST00000309428 ENPP5Q9UJA9 477 aa12.27□□□□□ -0.44
RETREG3-201ENST00000309428 CARD8Q9Y2G2 431 aa12.27□□□□□ -0.44
RETREG3-201ENST00000309428 MAP4K5Q9Y4K4 846 aa12.27□□□□□ -0.44
RETREG3-201ENST00000309428 CTDSP2O14595 271 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 OR10H3O60404 316 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 SCELO95171 688 aa12.27□□□□□ -0.45
RETREG3-201ENST00000309428 PSKH1P11801 424 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms