RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 NDUFS3O75489 264 aa8□□□□□ -1.13
CHD6-201ENST00000309279 POP7O75817 140 aaKnown RBP8□□□□□ -1.13
CHD6-201ENST00000309279 GSTM1P09488 218 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ERVK-10P10266 1014 aa8□□□□□ -1.13
CHD6-201ENST00000309279 PRG2P13727 222 aa8□□□□□ -1.13
CHD6-201ENST00000309279 AK4P27144 223 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 SSTR1P30872 391 aa8□□□□□ -1.13
CHD6-201ENST00000309279 LEPRP48357 1165 aaKnown RBP8□□□□□ -1.13
CHD6-201ENST00000309279 GPX6P59796 221 aa8□□□□□ -1.13
CHD6-201ENST00000309279 GSTM4Q03013 218 aa8□□□□□ -1.13
CHD6-201ENST00000309279 CLCQ05315 142 aa8□□□□□ -1.13
CHD6-201ENST00000309279 CHIT1Q13231 466 aa8□□□□□ -1.13
CHD6-201ENST00000309279 CTBP1Q13363 440 aa8□□□□□ -1.13
CHD6-201ENST00000309279 C1orf61Q13536 156 aa8□□□□□ -1.13
CHD6-201ENST00000309279 CYLC2Q14093 348 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 NCF4Q15080 339 aa8□□□□□ -1.13
CHD6-201ENST00000309279 UAP1L1Q3KQV9 507 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ZNF658BQ4V348 819 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 C6orf132Q5T0Z8 1188 aa8□□□□□ -1.13
CHD6-201ENST00000309279 TEDDM1Q5T9Z0 273 aa8□□□□□ -1.13
CHD6-201ENST00000309279 CES4AQ5XG92 561 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ZNF470Q6ECI4 717 aa8□□□□□ -1.13
CHD6-201ENST00000309279 TRMT10BQ6PF06 316 aaKnown RBP8□□□□□ -1.13
CHD6-201ENST00000309279 KIAA0408Q6ZU52 694 aa8□□□□□ -1.13
CHD6-201ENST00000309279 C3orf62Q6ZUJ4 267 aa8□□□□□ -1.13
CHD6-201ENST00000309279 MOGAT3Q86VF5 341 aa8□□□□□ -1.13
CHD6-201ENST00000309279 PACS2Q86VP3 889 aa8□□□□□ -1.13
CHD6-201ENST00000309279 AMZ2Q86W34 360 aa8□□□□□ -1.13
CHD6-201ENST00000309279 CCDC25Q86WR0 208 aa8□□□□□ -1.13
CHD6-201ENST00000309279 LRRC6Q86X45 466 aa8□□□□□ -1.13
CHD6-201ENST00000309279 TRAPPC5Q8IUR0 188 aa8□□□□□ -1.13
CHD6-201ENST00000309279 DENND6AQ8IWF6 608 aa8□□□□□ -1.13
CHD6-201ENST00000309279 FBXW8Q8N3Y1 598 aa8□□□□□ -1.13
CHD6-201ENST00000309279 FAM181AQ8N9Y4 354 aa8□□□□□ -1.13
CHD6-201ENST00000309279 C2CD4AQ8NCU7 369 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 OR2L2Q8NH16 312 aa8□□□□□ -1.13
CHD6-201ENST00000309279 HUS1BQ8NHY5 278 aa8□□□□□ -1.13
CHD6-201ENST00000309279 BAHD1Q8TBE0 780 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 SLC26A7Q8TE54 656 aa8□□□□□ -1.13
CHD6-201ENST00000309279 LPGAT1Q92604 370 aa8□□□□□ -1.13
CHD6-201ENST00000309279 SPACA9Q96E40 222 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 C9orf72Q96LT7 481 aa8□□□□□ -1.13
CHD6-201ENST00000309279 BIRC8Q96P09 236 aa8□□□□□ -1.13
CHD6-201ENST00000309279 KCNC2Q96PR1 638 aa8□□□□□ -1.13
CHD6-201ENST00000309279 SMC6Q96SB8 1091 aa8□□□□□ -1.13
CHD6-201ENST00000309279 SH3GL2Q99962 352 aa8□□□□□ -1.13
CHD6-201ENST00000309279 SYNDIG1Q9H7V2 258 aa8□□□□□ -1.13
CHD6-201ENST00000309279 NRIP3Q9NQ35 241 aa8□□□□□ -1.13
CHD6-201ENST00000309279 FOXD3Q9UJU5 478 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 FBXO5Q9UKT4 447 aa8□□□□□ -1.13
CHD6-201ENST00000309279 NFU1Q9UMS0 254 aa8□□□□□ -1.13
CHD6-201ENST00000309279 BTBD3Q9Y2F9 522 aa8□□□□□ -1.13
CHD6-201ENST00000309279 NAALAD2Q9Y3Q0 740 aa8□□□□□ -1.13
CHD6-201ENST00000309279 PLEKHM1Q9Y4G2 1056 aa8□□□□□ -1.13
CHD6-201ENST00000309279 PRSS21Q9Y6M0 314 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ASXL3Q9C0F0 2248 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 TCRBV9S1A1TA0A576 114 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 XKRY2A2RUG3 117 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 TAF4O00268 1085 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 TRIM38O00635 465 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 PGRMC2O15173 223 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 SPAG6O75602 509 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 F12P00748 615 aaPredicted RBP7.99□□□□□ -1.13
CHD6-201ENST00000309279 C1QAP02745 245 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 ANXA6P08133 673 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 FGF4P08620 206 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 OR56A5P0C7T3 313 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 ACP5P13686 325 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 SDHBP21912 280 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 ACTR1BP42025 376 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 SLC1A2P43004 574 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 ABATP80404 500 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 TAP2Q03519 686 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 MGAT5Q09328 741 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 RPA4Q13156 261 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 DEFB133Q30KQ1 61 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 ZNF789Q5FWF6 425 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 METRNLQ641Q3 311 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 CRTC3Q6UUV7 619 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 WASH2PQ6VEQ5 465 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 GK5Q6ZS86 529 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 BEND4Q6ZU67 534 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 DET1Q7L5Y6 550 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 TAF8Q7Z7C8 310 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 CDH24Q86UP0 819 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 C17orf82Q86X59 251 aaPredicted RBP7.99□□□□□ -1.13
CHD6-201ENST00000309279 NAXDQ8IW45 347 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 SULF2Q8IWU5 870 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 BEND7Q8N7W2 519 aaPredicted RBP7.99□□□□□ -1.13
CHD6-201ENST00000309279 FAM46DQ8NEK8 389 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 OR6S1Q8NH40 331 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 B4GALNT2Q8NHY0 566 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 RHBDD1Q8TEB9 315 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 NAT14Q8WUY8 206 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 TTC9Q92623 222 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 ABHD17AQ96GS6 310 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 C7orf34Q96L11 122 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 CCM2Q9BSQ5 444 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 PINK1Q9BXM7 581 aa7.99□□□□□ -1.13
CHD6-201ENST00000309279 EPN3Q9H201 632 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms