RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 FAM149B1Q96BN6 582 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 ROPN1LQ96C74 230 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 RCN3Q96D15 328 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 NEIL1Q96FI4 390 aaPredicted RBP4.78□□□□□ -1.64
CKS1B-201ENST00000308987 SIPA1Q96FS4 1042 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 SMARCD1Q96GM5 515 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 AJUBAQ96IF1 538 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 MPP4Q96JB8 637 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 GPR78Q96P69 363 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 FCRL5Q96RD9 977 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 MED10Q9BTT4 135 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 SLC25A23Q9BV35 468 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 MLPHQ9BV36 600 aaPredicted RBP4.78□□□□□ -1.64
CKS1B-201ENST00000308987 ZDHHC5Q9C0B5 715 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 OSBPL2Q9H1P3 480 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 MUC13Q9H3R2 512 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 MTG2Q9H4K7 406 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 PRORYQ9H606 182 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 MEAF6Q9HAF1 191 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 ARNT2Q9HBZ2 717 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 TM9SF3Q9HD45 589 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 SLC6A20Q9NP91 592 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 PNPLA3Q9NST1 481 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 TBCCD1Q9NVR7 557 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 ARMC1Q9NVT9 282 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 TMEM45AQ9NWC5 275 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 COMMD8Q9NX08 183 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 ELOVL2Q9NXB9 296 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 UBAP1Q9NZ09 502 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 CLIC5Q9NZA1 410 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 SEPT10Q9P0V9 454 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 CD300AQ9UGN4 299 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 ZNHIT2Q9UHR6 403 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 SLC39A10Q9ULF5 831 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 RUVBL2Q9Y230 463 aaKnown RBP4.78□□□□□ -1.64
CKS1B-201ENST00000308987 AP4S1Q9Y587 144 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 PCDHGB2Q9Y5G2 931 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 COPG1Q9Y678 874 aaKnown RBP4.78□□□□□ -1.64
CKS1B-201ENST00000308987 CRYBG3Q68DQ2 2970 aa4.78□□□□□ -1.64
CKS1B-201ENST00000308987 USP9XQ93008 2570 aaPredicted RBP4.78□□□□□ -1.64
CKS1B-201ENST00000308987 USP9YO00507 2555 aaPredicted RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 CHD5Q8TDI0 1954 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 A0A087WXM4 84 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TRIM64A6NGJ6 449 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 AQP12BA6NM10 295 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 H3BNH8 94 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 UBDO15205 165 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 HNRNPRO43390 633 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TSPAN3O60637 253 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 CDC14BO60729 498 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TRMUO75648 421 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 VAPBO95292 243 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 H6PDO95479 791 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 RECKO95980 971 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 AHSGP02765 367 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 WNT1P04628 370 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 IGHV4-34P06331 123 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 HMBSP08397 361 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ENO2P09104 434 aaPredicted RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 FAM200BP0CF97 657 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ZNF888P0CJ79 500 aaPredicted RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ENO3P13929 434 aaPredicted RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 GNSP15586 552 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 HOXD9P28356 352 aaPredicted RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ADORA2BP29275 332 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 EPHA3P29320 983 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 HLA-FP30511 346 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 CORO1AP31146 461 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ATP5C1P36542 298 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ARCN1P48444 511 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 CD151P48509 253 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 SGSHP51688 502 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 NAGLUP54802 743 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 RPS14P62263 151 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 HPCAP84074 193 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 IRF9Q00978 393 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 MS4A2Q01362 244 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 SULT2A1Q06520 285 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 FOXM1Q08050 763 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ADIGQ0VDE8 80 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 BNIP2Q12982 314 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TUBA3CQ13748 450 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 MYLK3Q32MK0 819 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 CCDC157Q569K6 752 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 C10orf120Q5SQS8 335 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 CERCAMQ5T4B2 595 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 INTS11Q5TA45 600 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 AGAP9Q5VTM2 703 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 BSPRYQ5W0U4 402 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 SDE2Q6IQ49 451 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 RWDD4Q6NW29 188 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 C8orf82Q6P1X6 216 aaPredicted RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TUBA3EQ6PEY2 450 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 FKBP9P1Q75LS8 142 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 KIAA0907Q7Z7F0 614 aaPredicted RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ADIPOR2Q86V24 386 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 CARM1Q86X55 608 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 AQP12AQ8IXF9 295 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 FAM217AQ8IXS0 508 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 CENPLQ8N0S6 344 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms