RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 RBM48Q5RL73 367 aaKnown RBP9.62□□□□□ -0.87
TMOD3-201ENST00000308580 CDH24Q86UP0 819 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 SLC30A8Q8IWU4 369 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 CAMK1GQ96NX5 476 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 PDCD10Q9BUL8 212 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 UTS2RQ9UKP6 389 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 MBLAC1A4D2B0 266 aaPredicted RBP9.62□□□□□ -0.87
TMOD3-201ENST00000308580 H7C0S8 307 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 TBX1O43435 398 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 RLN1P04808 185 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 BLKP51451 505 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 ALDH3A2P51648 485 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 SCN1BQ07699 218 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 PM20D1Q6GTS8 502 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 ANKHQ9HCJ1 492 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 SPIN1Q9Y657 262 aaPredicted RBP9.62□□□□□ -0.87
TMOD3-201ENST00000308580 MYH11P35749 1972 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 HTRA2O43464 458 aaPredicted RBP9.62□□□□□ -0.87
TMOD3-201ENST00000308580 C6orf47O95873 294 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 C8BP07358 591 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 GIMD1P0DJR0 217 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 CD68P34810 354 aaPredicted RBP9.62□□□□□ -0.87
TMOD3-201ENST00000308580 PPP2R2BQ00005 443 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 OR9A1PQ8NGU1 263 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 ZNF641Q96N77 438 aaPredicted RBP9.62□□□□□ -0.87
TMOD3-201ENST00000308580 YTHDF1Q9BYJ9 559 aaKnown RBP9.62□□□□□ -0.87
TMOD3-201ENST00000308580 SMURF2Q9HAU4 748 aa9.62□□□□□ -0.87
TMOD3-201ENST00000308580 THUMPD1Q9NXG2 353 aaKnown RBP9.62□□□□□ -0.87
TMOD3-201ENST00000308580 TSPAN6O43657 245 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 CSF2RAP15509 400 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 NRIP1P48552 1158 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 KIAA1161Q6NSJ0 714 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 RANBP10Q6VN20 620 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 RANBP9Q96S59 729 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 GAS2L1Q99501 681 aaPredicted RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 ING3Q9NXR8 418 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 CLDND1Q9NY35 253 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 GPN3Q9UHW5 284 aaPredicted RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 LOC100130705A0A1B0GUX0 176 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 PTGES3Q15185 160 aaKnown RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 NDUFA5Q16718 116 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 KLHL22Q53GT1 634 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 BICRALQ6AI39 1079 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 ZNF783Q6ZMS7 281 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 DCUN1D3Q8IWE4 304 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 UBE2J2Q8N2K1 259 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 TRPV1Q8NER1 839 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 RPF2Q9H7B2 306 aaKnown RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 DFNA5O60443 496 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 FESP07332 822 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 PFKMP08237 780 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 UBXN2BQ14CS0 331 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 NATD1Q8N6N6 113 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 OR4E2Q8NGC2 313 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 WWP2O00308 870 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 GRID2O43424 1007 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 TCEA1P23193 301 aaKnown RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 BTN3A2P78410 334 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 MEP1AQ16819 746 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 EIPR1Q53HC9 387 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 PLEKHS1Q5SXH7 462 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 GHDCQ8N2G8 530 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 TSPEARQ8WU66 669 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 TRNT1Q96Q11 434 aaKnown RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 TBX5Q99593 518 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 RNF186Q9NXI6 227 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 MYH13Q9UKX3 1938 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 ZNF776Q68DI1 518 aaPredicted RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 TSEN15Q8WW01 171 aaKnown RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 ZUFSPQ96AP4 578 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 TOR3AQ9H497 397 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 ELAC1Q9H777 363 aaKnown RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 MALT1Q9UDY8 824 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 POFUT2Q9Y2G5 429 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 SDK1Q7Z5N4 2213 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 TLR4O00206 839 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 PRAMEF12O95522 483 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 SLC10A3P09131 477 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 PRSS56P0CW18 603 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 C8orf89P0DMQ9 161 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 GRK6P43250 576 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 SUZ12Q15022 739 aaKnown RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 ZNF648Q5T619 568 aaPredicted RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 NOXRED1Q6NXP6 359 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 LIN28AQ9H9Z2 209 aaKnown RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 SPHK2Q9NRA0 654 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 MRPS17Q9Y2R5 130 aaKnown RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 TEX28O15482 410 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 NPPAP01160 153 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 RHOP08100 348 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 MASP1P48740 699 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 SLC15A3Q8IY34 581 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 KRTCAP2Q8N6L1 136 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 RPRD1BQ9NQG5 326 aaKnown RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 NFKBIL1Q9UBC1 381 aaPredicted RBP9.61□□□□□ -0.87
TMOD3-201ENST00000308580 RIMKLBQ9ULI2 386 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 MYH8P13535 1937 aa9.61□□□□□ -0.87
TMOD3-201ENST00000308580 DAPL1A0PJW8 107 aa9.6□□□□□ -0.87
TMOD3-201ENST00000308580 FDXRP22570 491 aa9.6□□□□□ -0.87
TMOD3-201ENST00000308580 CSTF2P33240 577 aaKnown RBP eCLIP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms