RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 WSCD2Q2TBF2 565 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 VWA5B1Q5TIE3 1220 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 METTL21CQ5VZV1 264 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 LIPJQ5W064 366 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 GK5Q6ZS86 529 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 SYT13Q7L8C5 426 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 STK32CQ86UX6 486 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 COMMD2Q86X83 199 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 IL17RCQ8NAC3 791 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 OR13H1Q8NG92 308 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 PIH1D2Q8WWB5 315 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 KHSRPQ92945 711 aaKnown RBP eCLIP8.96□□□□□ -0.98
PTPRE-202ENST00000306042 ZHX1-C8orf76Q96EF9 292 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 TTYH1Q9H313 450 aaPredicted RBP8.96□□□□□ -0.98
PTPRE-202ENST00000306042 Q9N2J8 555 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 KLRF1Q9NZS2 232 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 N6AMT1Q9Y5N5 214 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 SAC3D1A6NKF1 404 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 TOP3BO95985 862 aaKnown RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 C1SP09871 688 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 IL7RP16871 459 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 ITGA3P26006 1051 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 KCNC1P48547 511 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 INHBCP55103 352 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 DEFB110Q30KQ9 67 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 KHDRBS2Q5VWX1 349 aaKnown RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 GPR153Q6NV75 609 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 CLNKQ7Z7G1 428 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 PLPP6Q8IY26 295 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 C11orf65Q8NCR3 313 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 AGBL5Q8NDL9 886 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 FAM13CQ8NE31 585 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 OR2L2Q8NH16 312 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 KCNC2Q96PR1 638 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 LGR4Q9BXB1 951 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 ARRDC1-AS1Q9H2J1 176 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 ACTR10Q9NZ32 417 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 WASF2Q9Y6W5 498 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 TRPM7Q96QT4 1865 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 NQO1P15559 274 aaKnown RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 HK3P52790 923 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 CTSCP53634 463 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 MTTPP55157 894 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 SLC25A3Q00325 362 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 SIGLEC14Q08ET2 396 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 SGCBQ16585 318 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 DUS1LQ6P1R4 473 aaKnown RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 DPP10Q8N608 796 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 MIEF2Q96C03 454 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 ZFYVE21Q9BQ24 234 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 TMEM168Q9H0V1 697 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 LDAHQ9H6V9 325 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 TMEM184CQ9NVA4 438 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 ZNF282Q9UDV7 671 aaPredicted RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 DUSP12Q9UNI6 340 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 TMED5Q9Y3A6 229 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 C9JVG2 144 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 TNFRSF10AO00220 468 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 TOR1BO14657 336 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 CAPN5O15484 640 aaPredicted RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 GJB3O75712 270 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 GBAP04062 536 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 FEN1P39748 380 aaKnown RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 SLC7A2P52569 658 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 OR4D2P58180 307 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 KIR2DS3Q14952 304 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 RCN1Q15293 331 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 TMEM196Q5HYL7 178 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 ZDHHC13Q8IUH4 622 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 FBXL6Q8N531 539 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 MFSD2AQ8NA29 543 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 ZNF527Q8NB42 609 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 VANGL1Q8TAA9 524 aaPredicted RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 LPGAT1Q92604 370 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 POP5Q969H6 163 aaKnown RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 HOPXQ9BPY8 73 aaPredicted RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 METTL7AQ9H8H3 244 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 EXOSC4Q9NPD3 245 aaKnown RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 POT1Q9NUX5 634 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 SLC39A1Q9NY26 324 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 NME7Q9Y5B8 376 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 BTN3A3O00478 584 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 FKBP6O75344 327 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 IGLV3-27P01718 113 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 CD1DP15813 335 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 GRK6P43250 576 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 ZNF140P52738 457 aaPredicted RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 BNIP2Q12982 314 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 TUBB3Q13509 450 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 ZNF267Q14586 743 aaPredicted RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 TMEM52BQ4KMG9 183 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 Q6ZNB5 142 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 TRIM73Q86UV7 250 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 ADIPOR2Q86V24 386 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 C12orf40Q86WS4 652 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 RHEBL1Q8TAI7 183 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 CNDP2Q96KP4 475 aaKnown RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 SMIM14Q96QK8 99 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 MMADHCQ9H3L0 296 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms