RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 C9orf43Q8TAL5 461 aaPredicted RBP12.89□□□□□ -0.35
DDX54-201ENST00000306014 SUSD6Q92537 303 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 SLC38A4Q969I6 547 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 PLAC1Q9HBJ0 212 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 TRPS1Q9UHF7 1281 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 PCDHB14Q9Y5E9 798 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 SMIM30A4D0T7 59 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 TBC1D3BA6NDS4 549 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 WNT9AO14904 365 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 NPRL3Q12980 569 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 SEMA3BQ13214 749 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDX54-201ENST00000306014 C11orf88Q6PI97 169 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 SNX29P2Q8IUI4 249 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 AIF1LQ9BQI0 150 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 C11orf84Q9BUA3 381 aaPredicted RBP12.89□□□□□ -0.35
DDX54-201ENST00000306014 GPR62Q9BZJ7 368 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 SACM1LQ9NTJ5 587 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 ZNF510Q9Y2H8 683 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 OARD1Q9Y530 152 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 NME7Q9Y5B8 376 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 UBR3Q6ZT12 1888 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 SLC35G4P0C7Q5 338 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 C4BPBP20851 252 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 SGCGQ13326 291 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 APOFQ13790 326 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 CXorf57Q6NSI4 855 aaKnown RBP12.89□□□□□ -0.35
DDX54-201ENST00000306014 SLC43A3Q8NBI5 491 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 FAM110BQ8TC76 370 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 ZNF675Q8TD23 568 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 GPR78Q96P69 363 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 PGAP2Q9UHJ9 254 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 A0A0G2JN53 185 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 A8MV72 311 aaPredicted RBP12.88□□□□□ -0.35
DDX54-201ENST00000306014 COCHO43405 550 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 SSNA1O43805 119 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 ARNTP27540 789 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 SLC11A1P49279 550 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 CDK5R2Q13319 367 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 TMEM53Q6P2H8 277 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 NDNFQ8TB73 568 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 GEMIN6Q8WXD5 167 aaKnown RBP12.88□□□□□ -0.35
DDX54-201ENST00000306014 KAT2AQ92830 837 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 CRELD1Q96HD1 420 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 PTPN18Q99952 460 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 OSBPL10Q9BXB5 764 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 MRPL39Q9NYK5 338 aaKnown RBP12.88□□□□□ -0.35
DDX54-201ENST00000306014 CD300AQ9UGN4 299 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 GABRQQ9UN88 632 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 OAS3Q9Y6K5 1087 aaKnown RBP12.88□□□□□ -0.35
DDX54-201ENST00000306014 KRBA1A5PL33 1030 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 MYADML2A6NDP7 307 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 LCKP06239 509 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 ATP1B2P14415 290 aaPredicted RBP12.88□□□□□ -0.35
DDX54-201ENST00000306014 ALDH3B2P48448 385 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 GATMP50440 423 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 MTAPQ13126 283 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 SELPLGQ14242 412 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 ZNF697Q5TEC3 545 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 LCN1P1Q5VSP4 162 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 CHST9Q7L1S5 443 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 BEND5Q7L4P6 421 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 SERINC5Q86VE9 423 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 PHYKPLQ8IUZ5 450 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 ARRDC2Q8TBH0 407 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 NECTIN3Q9NQS3 549 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 C14orf119Q9NWQ9 140 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 MS4A12Q9NXJ0 267 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 ING4Q9UNL4 249 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 RPL36Q9Y3U8 105 aaKnown RBP12.88□□□□□ -0.35
DDX54-201ENST00000306014 YIPF1Q9Y548 306 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 LAMB2P55268 1798 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 TLR4O00206 839 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 BTN3A3O00478 584 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 GJA1P17302 382 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 CRHBPP24387 322 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 SHMT2P34897 504 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 XKP51811 444 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 NKX2-5P52952 324 aaPredicted RBP12.88□□□□□ -0.35
DDX54-201ENST00000306014 FBXW4P57775 412 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 CBX2Q14781 532 aaPredicted RBP12.88□□□□□ -0.35
DDX54-201ENST00000306014 GPRC6AQ5T6X5 926 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 AGTRAPQ6RW13 159 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 MACC1Q6ZN28 852 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 TPRG1Q6ZUI0 275 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 PGBD3Q8N328 593 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 GPR150Q8NGU9 434 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 KCNN1Q92952 543 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 SLC30A2Q9BRI3 323 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 OR51B5Q9H339 312 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 CSNK1G1Q9HCP0 422 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 IMP3Q9NV31 184 aaKnown RBP12.88□□□□□ -0.35
DDX54-201ENST00000306014 NKIRAS2Q9NYR9 191 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 MKLN1Q9UL63 735 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 PRKAB1Q9Y478 270 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 K7ERQ8 282 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 KLK1P06870 262 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 STSP08842 583 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 BDKRB1P46663 353 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 BNC1Q01954 994 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms