RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 GPR156Q8NFN8 814 aa6.31□□□□□ -1.4
USP47-201ENST00000305481 OR8J2Q8NGG1 315 aa6.31□□□□□ -1.4
USP47-201ENST00000305481 OR5K2Q8NHB8 316 aa6.31□□□□□ -1.4
USP47-201ENST00000305481 DNAJB8Q8NHS0 232 aa6.31□□□□□ -1.4
USP47-201ENST00000305481 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.31□□□□□ -1.42e-8■■■■■ 27.2
USP47-201ENST00000305481 FIG4Q92562 907 aa6.31□□□□□ -1.4
USP47-201ENST00000305481 RAD51AP1Q96B01 352 aa6.31□□□□□ -1.4
USP47-201ENST00000305481 METTL2AQ96IZ6 378 aaKnown RBP6.31□□□□□ -1.4
USP47-201ENST00000305481 RIPOR3Q96MK2 946 aa6.31□□□□□ -1.4
USP47-201ENST00000305481 CHID1Q9BWS9 393 aa6.31□□□□□ -1.4
USP47-201ENST00000305481 RMND5AQ9H871 391 aa6.31□□□□□ -1.4
USP47-201ENST00000305481 SLC24A3Q9HC58 644 aa6.31□□□□□ -1.4
USP47-201ENST00000305481 CCDC177Q9NQR7 707 aaPredicted RBP6.31□□□□□ -1.4
USP47-201ENST00000305481 CLDND1Q9NY35 253 aa6.31□□□□□ -1.4
USP47-201ENST00000305481 UTS2RQ9UKP6 389 aa6.31□□□□□ -1.4
USP47-201ENST00000305481 TDRKHQ9Y2W6 561 aaKnown RBP6.31□□□□□ -1.4
USP47-201ENST00000305481 NUP214P35658 2090 aaPredicted RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 A0A1W2PQU0 124 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 ELOVL7A1L3X0 281 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 UPK1AO00322 258 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 SAP18O00422 153 aaKnown RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 PLOD2O00469 737 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 RFXANKO14593 260 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 PRMT3O60678 531 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 GBAP04062 536 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 ANXA4P09525 319 aaPredicted RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 MYCLP1P12525 358 aaPredicted RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 CDH1P12830 882 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 EFNA1P20827 205 aaPredicted RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 CTHP32929 405 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 HSPA13P48723 471 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 RPS21P63220 83 aaKnown RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 MYBPC1Q00872 1141 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 ATP6AP1Q15904 470 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 DUOXA1Q1HG43 343 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 RNF220Q5VTB9 566 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 CAPRIN2Q6IMN6 1127 aaKnown RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 GALNT18Q6P9A2 607 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 MSANTD1Q6ZTZ1 278 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 SPRED1Q7Z699 444 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 FAM129CQ86XR2 697 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 DCUN1D3Q8IWE4 304 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 TBC1D21Q8IYX1 336 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 OR14C36Q8NHC7 312 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 RNF145Q96MT1 663 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 EFCAB11Q9BUY7 163 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 VCXQ9H320 206 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 OR51B5Q9H339 312 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 CD93Q9NPY3 652 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 DMRT3Q9NQL9 472 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 DYRK1BQ9Y463 629 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 PLEKHM1Q9Y4G2 1056 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 DNMT3AQ9Y6K1 912 aaPredicted RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 A0A1W2PPV9 198 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 PRR19A6NJB7 356 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 SCAMP2O15127 329 aaKnown RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 KMOO15229 486 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 TGFB1P01137 390 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 CEACAM5P06731 702 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 SMIM18P0DKX4 95 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 COX7A2P14406 83 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 PCSK2P16519 638 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 KELP23276 732 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 TEAD1P28347 426 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 IGFALSP35858 605 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 CLCNKAP51800 687 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 HNRNPFP52597 415 aaKnown RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 ADPRHP54922 357 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 SRSF11Q05519 484 aaKnown RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 PON2Q15165 354 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 MLF2Q15773 248 aaPredicted RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 HKDC1Q2TB90 917 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 TBPL2Q6SJ96 375 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 CHST15Q7LFX5 561 aaPredicted RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 GPR155Q7Z3F1 870 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 COMMD6Q7Z4G1 85 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 MICU2Q8IYU8 434 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 TMEM132CQ8N3T6 1108 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 CDC26Q8NHZ8 85 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 WDR48Q8TAF3 677 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 NETO1Q8TDF5 533 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 SETD7Q8WTS6 366 aaKnown RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 SH3KBP1Q96B97 665 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 SH3GL1Q99961 368 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 ACAT2Q9BWD1 397 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 FZD3Q9NPG1 666 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 ADGRE2Q9UHX3 823 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 ZNF639Q9UID6 485 aa6.3□□□□□ -1.4
USP47-201ENST00000305481 TNRC18O15417 2968 aaPredicted RBP6.3□□□□□ -1.4
USP47-201ENST00000305481 MYOCOSA0A1B0GUC4 107 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 EME2A4GXA9 379 aaPredicted RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 CXCR6O00574 342 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 FPGTO14772 594 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PI15O43692 258 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PRSS23O95084 383 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 KLF8O95600 359 aaPredicted RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 ACP5P13686 325 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 IDSP22304 550 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 MAT2AP31153 395 aaKnown RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 TIA1P31483 386 aaKnown RBP eCLIP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms