RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 SLC30A4O14863 429 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 TLX2O43763 284 aaPredicted RBP11.79□□□□□ -0.52
PDGFD-201ENST00000302251 CLDN7O95471 211 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 ALDH1A1P00352 501 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 DHFRP00374 187 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 ANXA8P13928 327 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 EDNRBP24530 442 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 MYL9P24844 172 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 MAPK12P53778 367 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 CCL23P55773 120 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 GALNT1Q10472 559 aaPredicted RBP11.79□□□□□ -0.52
PDGFD-201ENST00000302251 BTBD16Q32M84 506 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 BCL7AQ4VC05 210 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 RUNDC3AQ59EK9 446 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 GCNT6Q5T4J0 391 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 C1orf52Q8N6N3 182 aaKnown RBP11.79□□□□□ -0.52
PDGFD-201ENST00000302251 NECTIN4Q96NY8 510 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 ANKRA2Q9H9E1 313 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 INIPQ9NRY2 104 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 TREX1Q9NSU2 369 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 TLR6Q9Y2C9 796 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 MGAMO43451 1857 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 H3BM21 787 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 KPNA3O00505 521 aaPredicted RBP11.79□□□□□ -0.52
PDGFD-201ENST00000302251 STX16O14662 325 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 SEPT4O43236 478 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 ACSL4O60488 711 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 TGFB1P01137 390 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 KCNE1P15382 129 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 ARNTP27540 789 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 OR1D2P34982 312 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 BNC1Q01954 994 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 CSTF1Q05048 431 aaKnown RBP11.79□□□□□ -0.52
PDGFD-201ENST00000302251 SCAPQ12770 1279 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 ZNF181Q2M3W8 571 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 GPAT3Q53EU6 434 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 PIK3R6Q5UE93 754 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 TICAM1Q8IUC6 712 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 ARHGAP12Q8IWW6 846 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 CLECL1Q8IZS7 167 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 TCEANCQ8N8B7 351 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 GOLM1Q8NBJ4 401 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 CSGALNACT1Q8TDX6 532 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 CLP1Q92989 425 aaKnown RBP11.79□□□□□ -0.52
PDGFD-201ENST00000302251 TBX5Q99593 518 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 CCDC177Q9NQR7 707 aaPredicted RBP11.79□□□□□ -0.52
PDGFD-201ENST00000302251 KCTD5Q9NXV2 234 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 SPO11Q9Y5K1 396 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 A0A0G2JN53 185 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 CLDN11O75508 207 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 SEC14L2O76054 403 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 CH25HO95992 272 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 NPPAP01160 153 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 ZNF157P51786 506 aaPredicted RBP11.78□□□□□ -0.52
PDGFD-201ENST00000302251 HNRNPA0Q13151 305 aaKnown RBP11.78□□□□□ -0.52
PDGFD-201ENST00000302251 PCBP1Q15365 356 aaKnown RBP eCLIP11.78□□□□□ -0.52
PDGFD-201ENST00000302251 TUBA3EQ6PEY2 450 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 PAQR9Q6ZVX9 377 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 CCDC59Q9P031 241 aaKnown RBP11.78□□□□□ -0.52
PDGFD-201ENST00000302251 IFT52Q9Y366 437 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 USP3Q9Y6I4 520 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 COL11A1P12107 1806 aaPredicted RBP11.78□□□□□ -0.52
PDGFD-201ENST00000302251 A0A1B0GTL3 188 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 FAM92AA1XBS5 289 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 FAM172BPA6NC97 362 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 TMEM221A6NGB7 291 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 ITGBL1O95965 494 aaPredicted RBP11.78□□□□□ -0.52
PDGFD-201ENST00000302251 CD72P21854 359 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 RPS3P23396 243 aaKnown RBP eCLIP11.78□□□□□ -0.52
PDGFD-201ENST00000302251 CA5AP35218 305 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 HSPB3Q12988 150 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 MTA1Q13330 715 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 CHRNA6Q15825 494 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 VMACQ2NL98 169 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 MZT2AQ6P582 158 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 B3GNT8Q7Z7M8 397 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 METTL4Q8N3J2 472 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 DPP10Q8N608 796 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 UBXN10Q96LJ8 280 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 MCMBPQ9BTE3 642 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 SMOC2Q9H3U7 446 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 MRM3Q9HC36 420 aaKnown RBP11.78□□□□□ -0.52
PDGFD-201ENST00000302251 EQTNQ9NQ60 294 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 CELF2O95319 508 aaKnown RBP11.78□□□□□ -0.52
PDGFD-201ENST00000302251 HPRP00739 348 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 PRPS1L1P21108 318 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 SRSF11Q05519 484 aaKnown RBP11.78□□□□□ -0.52
PDGFD-201ENST00000302251 AQP6Q13520 282 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 ANXA8L1Q5VT79 327 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 BEND5Q7L4P6 421 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 LRRTM3Q86VH5 581 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 ZFP41Q8N8Y5 198 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 SLC16A10Q8TF71 515 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 RHNO1Q9BSD3 238 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 MAGEH1Q9H213 219 aa11.78□□□□□ -0.52
PDGFD-201ENST00000302251 ARID1AO14497 2285 aa11.77□□□□□ -0.52
PDGFD-201ENST00000302251 ASCC3Q8N3C0 2202 aaKnown RBP11.77□□□□□ -0.52
PDGFD-201ENST00000302251 CPSF4LA6NMK7 179 aaKnown RBP11.77□□□□□ -0.52
PDGFD-201ENST00000302251 NME6O75414 186 aaPredicted RBP11.77□□□□□ -0.52
PDGFD-201ENST00000302251 CAPNS1P04632 268 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms