RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 PAMR1Q6UXH9 720 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 TMPRSS11AQ6ZMR5 421 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 CBLL1Q75N03 491 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 TRIM46Q7Z4K8 759 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 POP5Q969H6 163 aaKnown RBP10.54□□□□□ -0.72
ZNF558-201ENST00000301475 MTFMTQ96DP5 389 aaKnown RBP10.54□□□□□ -0.72
ZNF558-201ENST00000301475 MYEOVQ96EZ4 313 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 SPATA17Q96L03 361 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 FEVQ99581 238 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 PKMYT1Q99640 499 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 MGLLQ99685 303 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 CCM2Q9BSQ5 444 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 TRIM62Q9BVG3 475 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 C11orf54Q9H0W9 315 aaPredicted RBP10.54□□□□□ -0.72
ZNF558-201ENST00000301475 C3orf14Q9HBI5 128 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 TMEM39AQ9NV64 488 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 A0A1W2PQ72 361 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 RFXANKO14593 260 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 RAMP2O60895 175 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 ULK1O75385 1050 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 IFI30P13284 250 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 CD72P21854 359 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 MYL9P24844 172 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 RGRP47804 291 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 SNRPD2P62316 118 aaKnown RBP10.53□□□□□ -0.72
ZNF558-201ENST00000301475 OLR1P78380 273 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 FAPQ12884 760 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 SERINC3Q13530 473 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 EIF3MQ7L2H7 374 aaKnown RBP10.53□□□□□ -0.72
ZNF558-201ENST00000301475 ZNF367Q7RTV3 350 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 TSEN54Q7Z6J9 526 aaKnown RBP10.53□□□□□ -0.72
ZNF558-201ENST00000301475 GLRX5Q86SX6 157 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 SERPINA11Q86U17 422 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 RNF130Q86XS8 419 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 FAM217AQ8IXS0 508 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 B3GNT7Q8NFL0 401 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 UBASH3BQ8TF42 649 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 TRMT61AQ96FX7 289 aaKnown RBP10.53□□□□□ -0.72
ZNF558-201ENST00000301475 SLC39A13Q96H72 371 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 TPD52L3Q96J77 140 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 EXOC2Q96KP1 924 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 B3GALT6Q96L58 329 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 COQ7Q99807 217 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 ACPTQ9BZG2 426 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 KATNBL1Q9H079 304 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 BPIFA1Q9NP55 256 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 ATP13A2Q9NQ11 1180 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 UBA2Q9UBT2 640 aaPredicted RBP10.53□□□□□ -0.72
ZNF558-201ENST00000301475 ALPK3Q96L96 1907 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 SLC28A1O00337 649 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 MANBAO00462 879 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 CXCL11O14625 94 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 TNFRSF10BO14763 440 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 POLR1CO15160 346 aaPredicted RBP10.53□□□□□ -0.72
ZNF558-201ENST00000301475 AKR7A2O43488 359 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 CELF2O95319 508 aaKnown RBP10.53□□□□□ -0.72
ZNF558-201ENST00000301475 FHP07954 510 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 SMIM10L2AP0DMW4 78 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 SMIM10L2BP0DMW5 78 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 MLLT3P42568 568 aaPredicted RBP10.53□□□□□ -0.72
ZNF558-201ENST00000301475 ARPP19P56211 112 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 NKX3-2P78367 333 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 PCBP1Q15365 356 aaKnown RBP eCLIP10.53□□□□□ -0.72
ZNF558-201ENST00000301475 FBXL22Q6P050 247 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 ADAMTSL2Q86TH1 951 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 RDH10Q8IZV5 341 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 UBE2J2Q8N2K1 259 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 YIPF7Q8N8F6 280 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 LPPQ93052 612 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 REPS1Q96D71 796 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 RMDN1Q96DB5 314 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 SERPINB11Q96P15 392 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 CNPPD1Q9BV87 410 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 TAPBPLQ9BX59 468 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 NARFLQ9H6Q4 476 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 MS4A12Q9NXJ0 267 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 RPS6KA6Q9UK32 745 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 PCDHGA2Q9Y5H1 932 aa10.53□□□□□ -0.72
ZNF558-201ENST00000301475 EFCAB10A6NFE3 127 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 LOC730098B7Z3J9 87 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 CDK2AP1O14519 115 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 TEX28O15482 410 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 SMPD1P17405 629 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 PXNP49023 591 aaPredicted RBP10.52□□□□□ -0.72
ZNF558-201ENST00000301475 CLDN8P56748 225 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 PSPHP78330 225 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 FCHO2Q0JRZ9 810 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 SMARCB1Q12824 385 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 C5orf22Q49AR2 442 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 ZRANB3Q5FWF4 1079 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 CCDC149Q6ZUS6 474 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 ZNF605Q86T29 641 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 PGBD3Q8N328 593 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 VWA5B2Q8N398 1253 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 SLC5A8Q8N695 610 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 DNAJB8Q8NHS0 232 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 UTP15Q8TED0 518 aaKnown RBP10.52□□□□□ -0.72
ZNF558-201ENST00000301475 HASPINQ8TF76 798 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 EPYCQ99645 322 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 ASPNQ9BXN1 380 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms