RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 IL1RAPQ9NPH3 570 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 PDP1Q9P0J1 537 aaPredicted RBP12.48□□□□□ -0.41
HIF3A-204ENST00000300862 VPS29Q9UBQ0 182 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 AP3M1Q9Y2T2 418 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 MAGEB17A8MXT2 336 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 GRM6O15303 877 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 AQP9O43315 295 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 TSPAN6O43657 245 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 SCN2BO60939 215 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 BCAS1O75363 584 aaPredicted RBP12.47□□□□□ -0.41
HIF3A-204ENST00000300862 LEFTY1O75610 366 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 ARHGEF15O94989 841 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 EPN2O95208 641 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 GSTT2P0CG29 244 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 GSTT2BP0CG30 244 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 PABPC1P11940 636 aaKnown RBP12.47□□□□□ -0.41
HIF3A-204ENST00000300862 PRPS1L1P21108 318 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 KDELR2P33947 212 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 GSSP48637 474 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 CLK3P49761 638 aaKnown RBP12.47□□□□□ -0.41
HIF3A-204ENST00000300862 EMX1Q04741 257 aaPredicted RBP12.47□□□□□ -0.41
HIF3A-204ENST00000300862 FOXD4Q12950 439 aaPredicted RBP12.47□□□□□ -0.41
HIF3A-204ENST00000300862 TSTA3Q13630 321 aaPredicted RBP12.47□□□□□ -0.41
HIF3A-204ENST00000300862 VMACQ2NL98 169 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 CDKL4Q5MAI5 379 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 TMEM215Q68D42 235 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 CNKSR3Q6P9H4 555 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 SLC16A12Q6ZSM3 486 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 METTL3Q86U44 580 aaKnown RBP12.47□□□□□ -0.41
HIF3A-204ENST00000300862 DNAJB8Q8NHS0 232 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 HSH2DQ96JZ2 352 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 OR4K3Q96R72 315 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 KLHL42Q9P2K6 505 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 DAPK2Q9UIK4 370 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 SAMD4AQ9UPU9 718 aaKnown RBP12.47□□□□□ -0.41
HIF3A-204ENST00000300862 TTC34A8MYJ7 566 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 TOR1BO14657 336 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 GBAP04062 536 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 ABCB1P08183 1280 aaPredicted RBP12.47□□□□□ -0.41
HIF3A-204ENST00000300862 PCMT1P22061 227 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 MAGEA2P43356 314 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 TUBA3CQ13748 450 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 BCL2A1Q16548 175 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 HKDC1Q2TB90 917 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 ARSIQ5FYB1 569 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 PLEKHS1Q5SXH7 462 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 SLC39A5Q6ZMH5 540 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 CCDC81Q6ZN84 652 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 B3GNT8Q7Z7M8 397 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 SERPINA11Q86U17 422 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 TMCO5AQ8N6Q1 288 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 CSGALNACT1Q8TDX6 532 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 MUL1Q969V5 352 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 MROQ9BYG7 248 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 CPEB1Q9BZB8 566 aaKnown RBP12.47□□□□□ -0.41
HIF3A-204ENST00000300862 RNF208Q9H0X6 261 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 RASSF1Q9NS23 344 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 ATP11BQ9Y2G3 1177 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 TMED5Q9Y3A6 229 aa12.47□□□□□ -0.41
HIF3A-204ENST00000300862 SAMHD1Q9Y3Z3 626 aaKnown RBP12.47□□□□□ -0.41
HIF3A-204ENST00000300862 SLC16A6O15403 523 aa12.46□□□□□ -0.41
HIF3A-204ENST00000300862 MPC1LP0DKB6 136 aa12.46□□□□□ -0.41
HIF3A-204ENST00000300862 PRPH2P23942 346 aa12.46□□□□□ -0.41
HIF3A-204ENST00000300862 ACSM2AQ08AH3 577 aa12.46□□□□□ -0.41
HIF3A-204ENST00000300862 MTAPQ13126 283 aa12.46□□□□□ -0.41
HIF3A-204ENST00000300862 DGCR6Q14129 220 aa12.46□□□□□ -0.41
HIF3A-204ENST00000300862 CCDC92Q53HC0 331 aaPredicted RBP12.46□□□□□ -0.41
HIF3A-204ENST00000300862 ACSM2BQ68CK6 577 aa12.46□□□□□ -0.41
HIF3A-204ENST00000300862 C1orf52Q8N6N3 182 aaKnown RBP12.46□□□□□ -0.41
HIF3A-204ENST00000300862 ASZ1Q8WWH4 475 aa12.46□□□□□ -0.41
HIF3A-204ENST00000300862 SH3YL1Q96HL8 342 aaPredicted RBP12.46□□□□□ -0.41
HIF3A-204ENST00000300862 ZNF641Q96N77 438 aaPredicted RBP12.46□□□□□ -0.41
HIF3A-204ENST00000300862 SAMD11Q96NU1 681 aa12.46□□□□□ -0.41
HIF3A-204ENST00000300862 HHIPQ96QV1 700 aa12.46□□□□□ -0.41
HIF3A-204ENST00000300862 ZNF347Q96SE7 839 aa12.46□□□□□ -0.41
HIF3A-204ENST00000300862 SIRT5Q9NXA8 310 aa12.46□□□□□ -0.41
HIF3A-204ENST00000300862 GIN1Q9NXP7 522 aa12.46□□□□□ -0.41
HIF3A-204ENST00000300862 LILRB3O75022 631 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 CNOT3O75175 753 aaKnown RBP12.46□□□□□ -0.42
HIF3A-204ENST00000300862 JRKO75564 520 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 SLC16A8O95907 504 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 FABP3P05413 133 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 TYRP14679 529 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 LAG3P18627 525 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 PDHA2P29803 388 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 HPCAL1P37235 193 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 RECQLP46063 649 aaPredicted RBP12.46□□□□□ -0.42
HIF3A-204ENST00000300862 AP1S2P56377 157 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 AGTRAPQ6RW13 159 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 ADIPOR2Q86V24 386 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 HORMAD1Q86X24 394 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 SNX29P2Q8IUI4 249 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 WDR20Q8TBZ3 569 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 MAGED4Q96JG8 741 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 YME1L1Q96TA2 773 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 TPT1P8Q9HAU6 139 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 SGK2Q9HBY8 427 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 ITM2BQ9Y287 266 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 ZNF451Q9Y4E5 1061 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 HCFC2Q9Y5Z7 792 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms