RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 UPK3BL1B0FP48 263 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 UPK3BL2E5RIL1 263 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 H6PDO95479 791 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CEACAM20Q6UY09 585 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 POP5Q969H6 163 aaKnown RBP13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SH3YL1Q96HL8 342 aaPredicted RBP13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CDKN2AIPNLQ96HQ2 116 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FCRL5Q96RD9 977 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 LYARQ9NX58 379 aaKnown RBP13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FXYD6-FXYD2A0A087WZ82 144 aa13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FAM170BA6NMN3 283 aa13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NARSO43776 548 aaKnown RBP13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PGGT1BP53609 377 aa13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TAS2R50P59544 299 aa13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GRASPQ7Z6J2 395 aaPredicted RBP13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TMED4Q7Z7H5 227 aa13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PHTF2Q8N3S3 785 aa13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RASGEF1AQ8N9B8 481 aa13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NCSTNQ92542 709 aa13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FXYD6Q9H0Q3 95 aa13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 EHD1Q9H4M9 534 aa13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RPL36Q9Y3U8 105 aaKnown RBP13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 DCCP43146 1447 aa13.21□□□□□ -0.3
CHRFAM7A-201ENST00000299847 G6PDP11413 515 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 VIPR1P32241 457 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 DAG1Q14118 895 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MEP1AQ16819 746 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC29A4Q7RTT9 530 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PIGWQ7Z7B1 504 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 HCAR2Q8TDS4 363 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ERMAPQ96PL5 475 aaPredicted RBP13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 S100A1P23297 94 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MAGEA12P43365 314 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 OGDHQ02218 1023 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RASGEF1BQ0VAM2 473 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SDR16C5Q8N3Y7 309 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NPIPA5E9PKD4 350 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 H3BNX3 289 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 L7N2F9 121 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SCDO00767 359 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MATN1P21941 496 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 LHCGRP22888 699 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 DNAJA1P31689 397 aaKnown RBP13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 VAMP2P63027 116 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 DNAJC27Q9NZQ0 273 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RBPJLQ9UBG7 517 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NPIPA1Q9UND3 350 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PCDHGA10Q9Y5H3 936 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SQORQ9Y6N5 450 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SPATA31D1Q6ZQQ2 1576 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 H3BSA7 217 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CDRT1O95170 752 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CLIC3O95833 236 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NADK2Q4G0N4 442 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 OSTM1Q86WC4 334 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC15A3Q8IY34 581 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PLA2G15Q8NCC3 412 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PHOSPHO1Q8TCT1 267 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC32A1Q9H598 525 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FBXL12Q9NXK8 326 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 LOC100130705A0A1B0GUX0 176 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CD2P06729 351 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 UGT8Q16880 541 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 DUOXA1Q1HG43 343 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ARHGAP40Q5TG30 622 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GALNT10Q86SR1 603 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FBXL8Q96CD0 374 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 HSPBAP1Q96EW2 488 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FZD8Q9H461 694 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SSU72Q9NP77 194 aaKnown RBP13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SPATA7Q9P0W8 599 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TNFRSF10DQ9UBN6 386 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC7A8Q9UHI5 535 aa13.2□□□□□ -0.3
CHRFAM7A-201ENST00000299847 A0A0D9SEW6 157 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 DLX3O60479 287 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 APOL3O95236 402 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 LDOC1O95751 146 aaPredicted RBP13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PNLIPRP1P54315 467 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GPX6P59796 221 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PPP1R3AQ16821 1122 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 BEND4Q6ZU67 534 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 KCTD9Q7L273 389 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CEP76Q8TAP6 659 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 KLHL6Q8WZ60 621 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 KCTD7Q96MP8 289 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 LDAHQ9H6V9 325 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TIMM8BQ9Y5J9 83 aaPredicted RBP13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ZNF860A6NHJ4 632 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TEX46H3BTG2 121 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 VILLO15195 856 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CNTN5O94779 1100 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CSNK2A2P19784 350 aaPredicted RBP13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RNF130Q86XS8 419 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ZNF527Q8NB42 609 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 LRRC20Q8TCA0 184 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CRELD1Q96HD1 420 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SMURF1Q9HCE7 757 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ZDHHC18Q9NUE0 388 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 A0A1W2PPL8 197 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms