RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PSMA8Q8TAA3 256 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 LGALS12Q96DT0 336 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 SAMD11Q96NU1 681 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 APOL4Q9BPW4 351 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 BRD9Q9H8M2 597 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 BACE2Q9Y5Z0 518 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 C5orf42Q9H799 3197 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 CYP4F2P78329 520 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 NPRL3Q12980 569 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 IL18R1Q13478 541 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 GAB1Q13480 694 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 INAVAQ3KP66 663 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 ZNF852Q6ZMS4 543 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 ENTHD1Q8IYW4 607 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 CADM3Q8N126 398 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 SPPL2AQ8TCT8 520 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 ZNF566Q969W8 418 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 BTBD2Q9BX70 525 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 ASPSCR1Q9BZE9 553 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 RLIMQ9NVW2 624 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 SH3BP4Q9P0V3 963 aa23.58■■□□□ 1.37
SPTSSA-201ENST00000298130 SCN5AQ14524 2016 aa23.58■■□□□ 1.36
SPTSSA-201ENST00000298130 SOCS5O75159 536 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 HLA-FP30511 346 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 LIPAP38571 399 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 SP3Q02447 781 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 CAMK2GQ13555 558 aaPredicted RBP23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 NAE1Q13564 534 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 ACOX1Q15067 660 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 DGUOKQ16854 277 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 GAREM2Q75VX8 874 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 C1orf52Q8N6N3 182 aaKnown RBP23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 L3MBTL4Q8NA19 623 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 DYNC2LI1Q8TCX1 351 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 RAET1EQ8TD07 263 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 MTG2Q9H4K7 406 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 SH3BP1Q9Y3L3 701 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 DOCK6Q96HP0 2047 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 AGAP14A8MT82 685 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 SAP18O00422 153 aaKnown RBP23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 PRPS1L1P21108 318 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 ACVR2AP27037 513 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 SLC13A2Q13183 592 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 DOC2AQ14183 400 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 NAGSQ8N159 534 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 OR4K1Q8NGD4 311 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 IL21Q9HBE4 155 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 VPS29Q9UBQ0 182 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 PAIP2BQ9ULR5 123 aaKnown RBP23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 B3GNT3Q9Y2A9 372 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 AP3M1Q9Y2T2 418 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 TRIM17Q9Y577 477 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 CDH23Q9H251 3354 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 GABRR3A8MPY1 467 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 GFRA2O00451 464 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 SLC22A1O15245 554 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 PCDH7O60245 1069 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 AOC2O75106 756 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 ATP1B2P14415 290 aaPredicted RBP23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 POU2F1P14859 743 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 MAPK1P28482 360 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 TM4SF4P48230 202 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 SYT6Q5T7P8 510 aaPredicted RBP23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 USP45Q70EL2 814 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 GALNT13Q8IUC8 556 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 CHCHD4Q8N4Q1 142 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 MROQ9BYG7 248 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 SLC6A14Q9UN76 642 aa23.57■■□□□ 1.36
SPTSSA-201ENST00000298130 JUNDP17535 347 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 BDKRB1P46663 353 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 IDH2P48735 452 aaKnown RBP23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 ACSM2AQ08AH3 577 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 KEAP1Q14145 624 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 ACSM2BQ68CK6 577 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 Q6ZVL8 140 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 CBLL1Q75N03 491 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 PLD3Q8IV08 490 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 CBARPQ8N350 705 aaPredicted RBP23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 SLC43A3Q8NBI5 491 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 OR6Q1Q8NGQ2 317 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 PCDHGB1Q9Y5G3 927 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 INSL5Q9Y5Q6 135 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 CBSLP0DN79 551 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 GPX2P18283 190 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 PBLDP30039 288 aaPredicted RBP23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 CBSP35520 551 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 IER5LQ5T953 404 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 RNF165Q6ZSG1 346 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 RNF168Q8IYW5 571 aaPredicted RBP23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 DUSP26Q9BV47 211 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 GABARAPL1Q9H0R8 117 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 ABCB10Q9NRK6 738 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 RPS6KA6Q9UK32 745 aa23.56■■□□□ 1.36
SPTSSA-201ENST00000298130 JUPP14923 745 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 MTAPQ13126 283 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 ASTLQ6HA08 431 aaPredicted RBP23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 EIF3MQ7L2H7 374 aaKnown RBP23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 HPS1Q92902 700 aa23.55■■□□□ 1.36
SPTSSA-201ENST00000298130 WDR12Q9GZL7 423 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms